Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 117 curated entries in PaperBLAST's database that match '6.3.1.2' as complete word(s).

These curated entries have 85 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc02613: glutamine synthetase
is similar to:
PaperBLAST

GLNA3_RHIME / O87393: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase III; GSIII; EC 6.3.1.2 from Rhizobium meliloti

100% id,
100% cov

Q0E5H7: glutamine synthetase (EC 6.3.1.2) from Halobacillus halophilus

37% id,
98% cov

GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei
B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

36% id,
95% cov

More...

SM_b20745: glutatmine synthetase II protein
is similar to:
PaperBLAST

GLNA2_RHILP / Q02154: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase II; GSII; EC 6.3.1.2 from Rhizobium leguminosarum

87% id,
99% cov

GLNA2_STRVR / P19432: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase II; GSII; EC 6.3.1.2 from Streptomyces viridochromogenes

48% id,
100% cov

gln1 / RF|NP_593400.1: glutamate-ammonia ligase Gln1; EC 6.3.1.2 from Schizosaccharomyces pombe

49% id,
92% cov

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SMc00948: glutamine synthetase
is similar to:
PaperBLAST

GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica
P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica

65% id,
100% cov

glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli
glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli

65% id,
100% cov

GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens

63% id,
100% cov

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SMc01594: hypothetical protein
is similar to:
PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

51% id,
98% cov

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

36% id,
85% cov

Q0E5H7: glutamine synthetase (EC 6.3.1.2) from Halobacillus halophilus

31% id,
99% cov

More...

SMc00762: glutamine synthetase
is similar to:
PaperBLAST

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

32% id,
99% cov

C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.

32% id,
98% cov

GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei
B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

32% id,
96% cov

More...

SMc01973: glutamine synthetase
is similar to:
PaperBLAST

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

31% id,
97% cov

GLNA_METJA / Q60182: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Methanocaldococcus jannaschii
Q60182: glutamine synthetase (EC 6.3.1.2) from Methanocaldococcus jannaschii

30% id,
97% cov

GLNA1_METMA / Q8PY99: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Methanosarcina mazei
Q8PY99: glutamine synthetase (EC 6.3.1.2) from Methanosarcina mazei

29% id,
98% cov

More...

SMc02352: glutamine synthetase
is similar to:
PaperBLAST

F2RM17: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

30% id,
91% cov

C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.

30% id,
89% cov

GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis
P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis

28% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory