Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 1 curated entries in PaperBLAST's database that match '2-deoxy-3-keto-D-ribonate cleavage enzyme' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc01637: hypothetical protein
is similar to:
PaperBLAST

H281DRAFT_00641: 2-deoxy-3-keto-D-ribonate cleavage enzyme from Paraburkholderia bryophila

33% id,
96% cov

SM_b20275: hypothetical protein
is similar to:
PaperBLAST

H281DRAFT_00641: 2-deoxy-3-keto-D-ribonate cleavage enzyme from Paraburkholderia bryophila

29% id,
42% cov

H281DRAFT_00641: 2-deoxy-3-keto-D-ribonate cleavage enzyme from Paraburkholderia bryophila

42% id,
20% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory