Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc00421: O-acetylserine sulfhydrylase A
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 53% id,
96% cov

SMc02595: cystathionine gamma-synthase
is similar to:		 PaperBLAST

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 44% id,
99% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 44% id,
98% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 44% id,
98% cov

More...

SMc02217: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 38% id,
99% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 38% id,
96% cov

MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis

 36% id,
100% cov

More...

SMc01976: hypothetical protein
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 40% id,
94% cov

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 38% id,
96% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 39% id,
91% cov

More...

SMc01174: cysteine synthase A
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 37% id,
97% cov

SMc01666: methionine gamma-lyase
is similar to:		 PaperBLAST

MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis

 36% id,
100% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 36% id,
98% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 35% id,
98% cov

More...

SMc02117: cystathionine beta-lyase
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 36% id,
99% cov

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 35% id,
99% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 35% id,
97% cov

More...

SMc01809: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:		 PaperBLAST

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 37% id,
95% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

 35% id,
99% cov

7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579

 34% id,
99% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory