Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 7 curated entries in PaperBLAST's database that match 'glutamylputrescine oxidase' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc01972: oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

55% id,
100% cov

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

55% id,
99% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

55% id,
99% cov

More...

SMc00761: oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

33% id,
99% cov

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

33% id,
98% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

33% id,
98% cov

More...

SMa1850: oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

32% id,
99% cov

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

33% id,
94% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

32% id,
94% cov

More...

SM_b21529: taurine dehydrogenase
is similar to:
PaperBLAST

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

31% id,
98% cov

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

31% id,
99% cov

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

30% id,
98% cov

SMc03132: oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

34% id,
91% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

34% id,
91% cov

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

33% id,
91% cov

More...

SMc01576: oxidoreductase
is similar to:
PaperBLAST

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

29% id,
99% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

29% id,
98% cov

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

30% id,
95% cov

More...

SMc03200: amino acid deaminase transmembrane protein
is similar to:
PaperBLAST

PP_2448: Gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas putida

25% id,
59% cov

AO356_21495: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

26% id,
58% cov

Pf6N2E2_80: gamma-glutamylputrescine oxidase (EC 1.4.3.-) from Pseudomonas fluorescens

24% id,
59% cov

SMc00797: oxidoreductase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

44% id,
11% cov

SMc03931: sarcosine oxidase subunit alpha
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

37% id,
12% cov

SMc01159: oxidoreductase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

58% id,
7% cov

SMc01717: mercuric reductase
is similar to:
PaperBLAST

PUUB_ECOLI / P37906: Gamma-glutamylputrescine oxidoreductase; Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase; EC 1.4.3.- from Escherichia coli
YcjA / b1301: γ-glutamylputrescine oxidase from Escherichia coli
puuB / P37906: γ-glutamylputrescine oxidase from Escherichia coli
puuB / BAD88709.1: gamma-glutamylputrescine oxidase from Escherichia coli

49% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory