Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 3 curated entries in PaperBLAST's database that match 'sorbitol-6-phosphate dehydrogenase' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 34 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMa0329: short chain alcohol dehydrogenase-related dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

33% id,
96% cov

SM_b21010: D-beta-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

32% id,
98% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

31% id,
98% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
96% cov

SM_b21159: short-chain dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
97% cov

SMa0854: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

31% id,
98% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

30% id,
98% cov

SMc02041: short chain dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
98% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

28% id,
99% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

27% id,
99% cov

SMa0335: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

32% id,
96% cov

SMa0339: short chain alcohol dehydrogenase-related dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
98% cov

SMa1629: short chain dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
98% cov

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

24% id,
77% cov

SMc02037: oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
99% cov

SMc01500: sorbitol dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
97% cov

SMc01991: short chain dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

30% id,
97% cov

SMa0513: gluconate 5-dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
99% cov

SMc00572: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

29% id,
98% cov

SMc01635: oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
97% cov

SMa0389: short chain alcohol dehydrogenase-related dehydrogenase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

29% id,
98% cov

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
97% cov

SM_b20511: short-chain dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
98% cov

SMc02336: oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
98% cov

SMa2165: short chain
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
97% cov

SMa0059: short-chain alcohol dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
95% cov

SM_b20692: 5-keto-D-gluconate 5-reductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

28% id,
98% cov

SMc00136: oxidoreductase
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

27% id,
98% cov

SMa0959: 3-ketoacyl-ACP reductase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

27% id,
98% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

25% id,
99% cov

SM_b20871: short-chain dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
97% cov

SMa1452: hypothetical protein
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

29% id,
90% cov

SMc00880: oxidoreductase
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

27% id,
97% cov

SM_b20210: oxidoreductase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

26% id,
99% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

26% id,
99% cov

SM_b21348: 2-deoxy-D-gluconate 3-dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

26% id,
97% cov

SMc01571: oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

26% id,
97% cov

SMa1367: short chain alcohol dehydrogenase-related dehydrogenase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

27% id,
94% cov

SM_b20750: dehydrogenase
is similar to:
PaperBLAST

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

24% id,
99% cov

SM_b20214: oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

31% id,
67% cov

SMa2019: oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

36% id,
49% cov

SMa2343: oxidoreductase
is similar to:
PaperBLAST

srlD / GI|2342569: sorbitol-6-phosphate dehydrogenase from Erwinia amylovora

25% id,
69% cov

srlD: sorbitol-6-phosphate dehydrogenase; EC 1.1.1.140 from Escherichia coli

22% id,
69% cov

SMc01204: transmembrane oxidoreductase
is similar to:
PaperBLAST

srlD / Q9X671: sorbitol-6-phosphate dehydrogenase subunit (EC 1.1.1.140) from Streptococcus mutans

26% id,
54% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 32 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory