Curated BLAST for Genomes

 

Curated BLAST

Searching in Sinorhizobium meliloti 1021 (Smeli)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Sinorhizobium meliloti 1021, or try another query

SMc01532: alpha-glycosylase
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

34% id,
96% cov

SMc03064: alpha-glucosidase
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

33% id,
94% cov

SM_b20099: maltose alpha-D-glucosyltransferase
is similar to:
PaperBLAST

3czkA / Q6UVM5: Crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose complex

28% id,
88% cov

AAQ93678.1: sucrose hydrolase (Suh) (EC 3.2.1.-)

28% id,
87% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

28% id,
87% cov

More...

SM_b21447: 1,4-alpha-glucan-branching protein
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

34% id,
22% cov

SMc03922: glycogen branching protein
is similar to:
PaperBLAST

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

27% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory