Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 27 curated entries in PaperBLAST's database that match '1.1.1.14' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0684: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

41% id,
94% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

37% id,
99% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

37% id,
97% cov

More...

Synpcc7942_1573: 3-oxoacyl-(acyl-carrier protein) reductase
is similar to:
PaperBLAST

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

34% id,
98% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

34% id,
98% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

32% id,
98% cov

More...

Synpcc7942_1596: short chain dehydrogenase
is similar to:
PaperBLAST

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

33% id,
90% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

32% id,
88% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

37% id,
75% cov

More...

Synpcc7942_0459: glutathione-dependent formaldehyde dehydrogenase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

29% id,
90% cov

xdh1 / Q876R2: D-sorbitol dehydrogenase (EC 1.1.1.14; EC 1.1.1.9) from Hypocrea jecorina

28% id,
88% cov

Q07786: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Saccharomyces cerevisiae

28% id,
90% cov

More...

Synpcc7942_0216: putative zinc-binding oxidoreductase
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

28% id,
77% cov

Synpcc7942_0861: bifunctional sterol desaturase/short chain dehydrogenase
is similar to:
PaperBLAST

Ac3H11_2940: D-sorbitol 2-dehydrogenase (EC 1.1.1.14) from Acidovorax sp.

28% id,
70% cov

Synpcc7942_0513: ATPase
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

33% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory