Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 61 curated entries in PaperBLAST's database that match '1.1.1.25'.

These curated entries have 43 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0684: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

Q9WYD3: D-arabinitol 2-dehydrogenase (EC 1.1.1.250) from Thermotoga maritima

41% id,
96% cov

tsaC / P94681: 4-sulfobenzyl alcohol dehydrogenase subunit (EC 1.1.1.257) from Comamonas testosteroni

37% id,
99% cov

T4HR_ZYMTI / F9XMW6: Probable tetrahydroxynaphthalene reductase MYCGRDRAFT_87994; Conidial pigment biosynthesis cluster 29 protein MYCGRDRAFT_87994; EC 1.1.1.252 from Zymoseptoria tritici

38% id,
96% cov

More...

Synpcc7942_2467: shikimate 5-dehydrogenase
is similar to:
PaperBLAST

AROE_GEOKA / Q5KWX7: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Geobacillus kaustophilus

38% id,
93% cov

AROE_METJA / Q58484: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Methanocaldococcus jannaschii
aroE / Q58484: shikimate dehydrogenase monomer (EC 1.1.1.25) from Methanocaldococcus jannaschii

35% id,
98% cov

O27957: shikimate dehydrogenase (EC 1.1.1.25) from Archaeoglobus fulgidus

35% id,
96% cov

More...

Synpcc7942_1573: 3-oxoacyl-(acyl-carrier protein) reductase
is similar to:
PaperBLAST

T4HR_ZYMTI / F9XMW6: Probable tetrahydroxynaphthalene reductase MYCGRDRAFT_87994; Conidial pigment biosynthesis cluster 29 protein MYCGRDRAFT_87994; EC 1.1.1.252 from Zymoseptoria tritici

36% id,
96% cov

T4HR_MAGO7 / Q12634: Tetrahydroxynaphthalene reductase; T4HN reductase; THNR; EC 1.1.1.252 from Magnaporthe oryzae
Q12634: tetrahydroxynaphthalene reductase (EC 1.1.1.252) from Magnaporthe oryzae

35% id,
90% cov

PFMAG_PESFW / W3XAA0: Tetrahydroxynaphthalene reductase PfmaG; Conidial pigment biosynthesis cluster protein G; EC 1.1.1.252 from Pestalotiopsis fici

33% id,
91% cov

Synpcc7942_0489: aldehyde dehydrogenase
is similar to:
PaperBLAST

TSAD1_COMTE / P94682: 4-(hydroxymethyl)benzenesulfonate dehydrogenase TsaD1; Toluenesulfonate aldehyde dehydrogenase TsaD; EC 1.1.1.257 from Comamonas testosteroni

31% id,
91% cov

Synpcc7942_0459: glutathione-dependent formaldehyde dehydrogenase
is similar to:
PaperBLAST

chnD / Q9F7D8: 6-hydroxyhexanoate dehydrogenase (EC 1.1.1.258) from Acinetobacter sp.

30% id,
96% cov

Synpcc7942_B2642: putative zinc-binding oxidoreductase
is similar to:
PaperBLAST

chnD / Q9F7D8: 6-hydroxyhexanoate dehydrogenase (EC 1.1.1.258) from Acinetobacter sp.

24% id,
99% cov

Synpcc7942_1596: short chain dehydrogenase
is similar to:
PaperBLAST

tsaC / P94681: 4-sulfobenzyl alcohol dehydrogenase subunit (EC 1.1.1.257) from Comamonas testosteroni

25% id,
92% cov

Q9WYD3: D-arabinitol 2-dehydrogenase (EC 1.1.1.250) from Thermotoga maritima

29% id,
77% cov

PFMAG_PESFW / W3XAA0: Tetrahydroxynaphthalene reductase PfmaG; Conidial pigment biosynthesis cluster protein G; EC 1.1.1.252 from Pestalotiopsis fici

25% id,
74% cov

Synpcc7942_0618: S-adenosyl-L-homocysteine hydrolase
is similar to:
PaperBLAST

O27957: shikimate dehydrogenase (EC 1.1.1.25) from Archaeoglobus fulgidus

25% id,
55% cov

Synpcc7942_0504: glutamyl-tRNA reductase
is similar to:
PaperBLAST

Q88RQ5: shikimate dehydrogenase (EC 1.1.1.25) from Pseudomonas putida

33% id,
31% cov

AROE_GEOKA / Q5KWX7: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Geobacillus kaustophilus

30% id,
32% cov

Q9WYI1: shikimate dehydrogenase (EC 1.1.1.25) from Thermotoga maritima

28% id,
29% cov

Synpcc7942_0525: 3-dehydroquinate synthase
is similar to:
PaperBLAST

ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans
aromA: pentafunctional AROM polypeptide; EC 1.1.1.25; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 4.2.3.4 from Emericella nidulans
P07547: shikimate dehydrogenase (EC 1.1.1.25) from Aspergillus nidulans

39% id,
23% cov

ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae
ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae

33% id,
21% cov

Q6W3D0: shikimate dehydrogenase (EC 1.1.1.25) from Toxoplasma gondii

32% id,
8% cov

Synpcc7942_0232: 3-phosphoshikimate 1-carboxyvinyltransferase
is similar to:
PaperBLAST

ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae
ARO1 / P08566: pentafunctional AROM polypeptide (EC 4.2.3.4; EC 1.1.1.25; EC 2.7.1.71; EC 2.5.1.19; EC 4.2.1.10) from Saccharomyces cerevisiae

27% id,
28% cov

Synpcc7942_2285: glycerol dehydrogenase
is similar to:
PaperBLAST

Q6W3D0: shikimate dehydrogenase (EC 1.1.1.25) from Toxoplasma gondii

23% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory