Searching in Synechococcus elongatus PCC 7942 (SynE)
Found 58 curated entries in PaperBLAST's database that match '1.1.1.25' as complete word(s).
These curated entries have 42 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Synechococcus elongatus PCC 7942, or try another query
Synpcc7942_2467: shikimate 5-dehydrogenase is similar to: | PaperBLAST |
AROE_GEOKA / Q5KWX7: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Geobacillus kaustophilus | 38% id, 93% cov |
CCNA_00003: shikimate dehydrogenase (EC 1.1.1.25) from Caulobacter crescentus | 35% id, 99% cov |
AROE_METJA / Q58484: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Methanocaldococcus jannaschii | 35% id, 98% cov |
Synpcc7942_0618: S-adenosyl-L-homocysteine hydrolase is similar to: | PaperBLAST |
O27957: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Archaeoglobus fulgidus | 25% id, 55% cov |
Synpcc7942_0504: glutamyl-tRNA reductase is similar to: | PaperBLAST |
Q88RQ5: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Pseudomonas putida | 33% id, 31% cov |
AROE_GEOKA / Q5KWX7: Shikimate dehydrogenase (NADP(+)); SDH; EC 1.1.1.25 from Geobacillus kaustophilus | 30% id, 32% cov |
CCNA_00003: shikimate dehydrogenase (EC 1.1.1.25) from Caulobacter crescentus | 37% id, 24% cov |
Synpcc7942_0525: 3-dehydroquinate synthase is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 39% id, 23% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 33% id, 21% cov |
Q6W3D0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Toxoplasma gondii | 32% id, 8% cov |
Synpcc7942_0232: 3-phosphoshikimate 1-carboxyvinyltransferase is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 27% id, 28% cov |
Synpcc7942_2285: glycerol dehydrogenase is similar to: | PaperBLAST |
Q6W3D0: shikimate dehydrogenase (NADP+) (EC 1.1.1.25) from Toxoplasma gondii | 23% id, 7% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory