Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.26' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1501: D-3-phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

GYAR_THELN / Q9C4M5: Glyoxylate reductase; EC 1.1.1.26 from Thermococcus litoralis
Q9C4M5: glyoxylate reductase (EC 1.1.1.26) from Thermococcus litoralis

37% id,
92% cov

GOR1_YEAST / P53839: Glyoxylate reductase 1; EC 1.1.1.26; EC 1.1.1.79; EC 1.1.1.81 from Saccharomyces cerevisiae
GOR1 / P53839: glyoxylate reductase 1 (EC 1.1.1.26) from Saccharomyces cerevisiae

29% id,
87% cov

2KGR_VITVI / A5CAL1: Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR; 2-keto-L-gulonate reductase; Vv2KGR; EC 1.1.1.26; EC 1.1.1.28; EC 1.1.1.79; EC 1.1.1.- from Vitis vinifera

31% id,
81% cov

More...

Synpcc7942_1857: 3-hydroxyacid dehydrogenase
is similar to:
PaperBLAST

Q9LSV0: glyoxylate reductase (EC 1.1.1.26); 4-hydroxybutyrate dehydrogenase (EC 1.1.1.61); glyoxylate reductase (NADP+) (EC 1.1.1.79) from Arabidopsis thaliana

31% id,
99% cov

Synpcc7942_1347: 2-hydroxyacid dehydrogenase-like
is similar to:
PaperBLAST

GYAR_THELN / Q9C4M5: Glyoxylate reductase; EC 1.1.1.26 from Thermococcus litoralis
Q9C4M5: glyoxylate reductase (EC 1.1.1.26) from Thermococcus litoralis

34% id,
82% cov

2KGR_VITVI / A5CAL1: Glyoxylate/hydroxypyruvate/pyruvate reductase 2KGR; 2-keto-L-gulonate reductase; Vv2KGR; EC 1.1.1.26; EC 1.1.1.28; EC 1.1.1.79; EC 1.1.1.- from Vitis vinifera

32% id,
82% cov

Q9UBQ7: glyoxylate reductase (EC 1.1.1.26); glyoxylate reductase (NADP+) (EC 1.1.1.79); hydroxypyruvate reductase (EC 1.1.1.81) from Homo sapiens

28% id,
85% cov

More...

Synpcc7942_0039: 6-phosphogluconate dehydrogenase
is similar to:
PaperBLAST

Q9LSV0: glyoxylate reductase (EC 1.1.1.26); 4-hydroxybutyrate dehydrogenase (EC 1.1.1.61); glyoxylate reductase (NADP+) (EC 1.1.1.79) from Arabidopsis thaliana

28% id,
71% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory