Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 131 curated entries in PaperBLAST's database that match '1.1.1.27'.

These curated entries have 102 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1700: GDP-fucose synthetase NAD dependent epimerase/dehydratase
is similar to:
PaperBLAST

FCL1_ARATH / O49213: GDP-L-fucose synthase 1; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase 1; AtFX; AtGER1; EC 1.1.1.271 from Arabidopsis thaliana
GER1 / O49213: GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase (EC 1.1.1.271) from Arabidopsis thaliana
O49213: GDP-L-fucose synthase (EC 1.1.1.271) from Arabidopsis thaliana

67% id,
95% cov

FCL2_ARATH / Q9LMU0: Putative GDP-L-fucose synthase 2; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase 2; AtGER2; EC 1.1.1.271 from Arabidopsis thaliana
Q9LMU0: GDP-L-fucose synthase (EC 1.1.1.271) from Arabidopsis thaliana

66% id,
95% cov

FCL_ECOLI / P32055: GDP-L-fucose synthase; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase; EC 1.1.1.271 from Escherichia coli
YefB / b2052: GDP-L-fucose synthase (EC 1.1.1.271) from Escherichia coli
fcl / P32055: GDP-L-fucose synthase (EC 1.1.1.271) from Escherichia coli
P32055: GDP-L-fucose synthase (EC 1.1.1.271) from Escherichia coli

57% id,
98% cov

More...

Synpcc7942_1347: 2-hydroxyacid dehydrogenase-like
is similar to:
PaperBLAST

HADHA_ASPOR / Q2UH56: 2-hydroxyacid dehydrogenase A; 2-HadhA; EC 1.1.1.272 from Aspergillus oryzae

51% id,
95% cov

MORA_ASPOR / Q2U0N3: 4-methyl-2-oxopentanoate reductase A; MOA reductase A; MorA; 2-hydroxyacid dehydrogenase D; 2-HadhD; EC 1.1.1.272 from Aspergillus oryzae
morA / Q2U0N3: D-2-hydroxyacid dehydrogenase (NADP+) (EC 1.1.1.272) from Aspergillus oryzae

27% id,
77% cov

Synpcc7942_0684: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

A0A0H2ZTN5: (+)-trans-carveol dehydrogenase (EC 1.1.1.275) from Mycobacterium avium

35% id,
96% cov

GAME25 / Q9LEG3: 3β-hydroxysteroid dehydrogenase/ Δ5,4 isomerase (EC 1.1.1.270) from Solanum lycopersicum

33% id,
96% cov

Q73SC8: (+)-trans-carveol dehydrogenase (EC 1.1.1.275) from Mycobacterium avium

33% id,
97% cov

More...

Synpcc7942_1573: 3-oxoacyl-(acyl-carrier protein) reductase
is similar to:
PaperBLAST

A0A0H2ZWY3: (+)-trans-carveol dehydrogenase (EC 1.1.1.275) from Mycobacterium avium

31% id,
99% cov

Q73SC8: (+)-trans-carveol dehydrogenase (EC 1.1.1.275) from Mycobacterium avium

31% id,
97% cov

A0A0H2ZTN5: (+)-trans-carveol dehydrogenase (EC 1.1.1.275) from Mycobacterium avium

30% id,
98% cov

More...

Synpcc7942_1596: short chain dehydrogenase
is similar to:
PaperBLAST

SDH_RHIRD / Q9KWN1: Serine 3-dehydrogenase; EC 1.1.1.276 from Rhizobium radiobacter

31% id,
96% cov

DHR11_HUMAN / Q6UWP2: Dehydrogenase/reductase SDR family member 11; 17-beta-hydroxysteroid dehydrogenase; 3-beta-hydroxysteroid 3-dehydrogenase; Estradiol 17-beta-dehydrogenase; Short-chain dehydrogenase/reductase family 24C member 1; EC 1.1.1.270; EC 1.1.1.62 from Homo sapiens

29% id,
97% cov

GAME25 / Q9LEG3: 3β-hydroxysteroid dehydrogenase/ Δ5,4 isomerase (EC 1.1.1.270) from Solanum lycopersicum

28% id,
97% cov

Synpcc7942_1717: glycolate oxidase subunit (Fe-S) protein
is similar to:
PaperBLAST

lutA / O07020: iron-sulfur oxidase subunit used in L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis

27% id,
99% cov

Q5F885: L-lactate dehydrogenase (subunit 3/3) (EC 1.1.1.27) from Neisseria gonorrhoeae

29% id,
84% cov

Synpcc7942_1501: D-3-phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

HADHA_ASPOR / Q2UH56: 2-hydroxyacid dehydrogenase A; 2-HadhA; EC 1.1.1.272 from Aspergillus oryzae

30% id,
84% cov

MORA_ASPOR / Q2U0N3: 4-methyl-2-oxopentanoate reductase A; MOA reductase A; MorA; 2-hydroxyacid dehydrogenase D; 2-HadhD; EC 1.1.1.272 from Aspergillus oryzae
morA / Q2U0N3: D-2-hydroxyacid dehydrogenase (NADP+) (EC 1.1.1.272) from Aspergillus oryzae

30% id,
82% cov

ddh / Q2VEQ7: (D)-2-hydroxyacid dehydrogenase (NADP+) monomer (EC 1.1.1.272) from Haloferax mediterranei
Q2VEQ7: D-2-hydroxyacid dehydrogenase (NADP+) (EC 1.1.1.272) from Haloferax mediterranei

28% id,
76% cov

Synpcc7942_0126: enoyl-(acyl carrier protein) reductase
is similar to:
PaperBLAST

Q73SC8: (+)-trans-carveol dehydrogenase (EC 1.1.1.275) from Mycobacterium avium

25% id,
96% cov

Synpcc7942_1160: hypothetical protein
is similar to:
PaperBLAST

SDMB_METCA / Q60A54: Sterol demethylase protein B; 3beta-hydroxysteroid 3-dehydrogenase; 3beta-hydroxysteroid-4beta-carboxylate 3-dehydrogenase (decarboxylating); EC 1.1.1.270; EC 1.1.1.417 from Methylococcus capsulatus
sdmB / Q60A54: 3β-hydroxysteroid-4α-carboxylate 3-dehydrogenase (decarboxylating)/3β-hydroxysteroid 3-dehydrogenase (EC 1.1.1.270; EC 1.1.1.417) from Methylococcus capsulatus

24% id,
75% cov

Synpcc7942_2503: protochlorophyllide oxidoreductase
is similar to:
PaperBLAST

SDH_RHIRD / Q9KWN1: Serine 3-dehydrogenase; EC 1.1.1.276 from Rhizobium radiobacter

27% id,
58% cov

Synpcc7942_2425: chaperon-like protein for quinone binding in photosystem II
is similar to:
PaperBLAST

3BHS1_RAT / P22071: 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1; 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type I; 3-beta-HSD I; 3-beta-hydroxy-5-ene steroid dehydrogenase; 3-beta-hydroxy-Delta(5)-steroid dehydrogenase; 3-beta-hydroxysteroid 3-dehydrogenase; Delta-5-3-ketosteroid isomerase; Dihydrotestosterone oxidoreductase; Steroid Delta-isomerase; EC 1.1.1.145; EC 1.1.1.270; EC 1.1.1.210; EC 5.3.3.1 from Rattus norvegicus

29% id,
33% cov

Synpcc7942_1933: isopentenyl pyrophosphate isomerase
is similar to:
PaperBLAST

Q44467: L-lactate dehydrogenase (EC 1.1.1.27); L-lactate oxidase (EC 1.1.3.2) from Aerococcus viridans

29% id,
26% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory