Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 148 curated entries in PaperBLAST's database that match '1.1.1.28'.

These curated entries have 116 distinct sequences.

Running ublast with E ≤ 0.01

Found 18 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0459: glutathione-dependent formaldehyde dehydrogenase
is similar to:
PaperBLAST

FRMA_ECOLI / P25437: S-(hydroxymethyl)glutathione dehydrogenase; Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC 1.1.1.284; EC 1.1.1.1; EC 1.1.1.- from Escherichia coli
AdhC / b0356: S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) from Escherichia coli
frmA / GB|BAA22412.1: S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.-; EC 1.1.1.1; EC 1.1.1.284 from Escherichia coli
frmA / P25437: S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) from Escherichia coli

71% id,
100% cov

ADHX_SPAAU / P79896: Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Sparus aurata

70% id,
98% cov

ADHH_GADMO / P81600: Alcohol dehydrogenase class-3 chain H; Alcohol dehydrogenase class-III chain H; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Gadus morhua

68% id,
98% cov

More...

Synpcc7942_1347: 2-hydroxyacid dehydrogenase-like
is similar to:
PaperBLAST

Q8EI78: D-lactate dehydrogenase (EC 1.1.1.28) from Shewanella oneidensis

56% id,
100% cov

Q9I530: D-lactate dehydrogenase (EC 1.1.1.28) from Pseudomonas aeruginosa

57% id,
98% cov

HtpH / b1380: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli
ldhA: D-lactate dehydrogenase; EC 1.1.1.28 from Escherichia coli
ldhA / P52643: D-lactate dehydrogenase (EC 1.1.1.28) from Escherichia coli

54% id,
100% cov

More...

Synpcc7942_1505: 3-isopropylmalate dehydrogenase
is similar to:
PaperBLAST

HICDH_THET2 / Q72IW9: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus
HICDH_THET8 / Q5SIJ1: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus

42% id,
99% cov

Q5JFV8: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Thermococcus kodakarensis

38% id,
88% cov

HICDH_PYRHO / O59394: Isocitrate/homoisocitrate dehydrogenase; HICDH; Beta-decarboxylating dehydrogenase; EC 1.1.1.286 from Pyrococcus horikoshii

35% id,
91% cov

More...

Synpcc7942_0684: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

Q58LW6: D-arabinitol dehydrogenase (NADP+) (EC 1.1.1.287) from Gluconobacter oxydans

38% id,
99% cov

Q308C1: D-arabinitol 4-dehydrogenase (EC 1.1.1.11); D-arabinitol dehydrogenase (NADP+) (EC 1.1.1.287) from Gluconobacter oxydans

36% id,
99% cov

Q7XZH5: xanthoxin dehydrogenase (EC 1.1.1.288) from Oryza sativa

35% id,
91% cov

More...

Synpcc7942_1573: 3-oxoacyl-(acyl-carrier protein) reductase
is similar to:
PaperBLAST

Q58LW6: D-arabinitol dehydrogenase (NADP+) (EC 1.1.1.287) from Gluconobacter oxydans

35% id,
98% cov

A0A0K1H1P6: xanthoxin dehydrogenase (EC 1.1.1.288) from Pisum sativum

33% id,
94% cov

Q308C1: D-arabinitol 4-dehydrogenase (EC 1.1.1.11); D-arabinitol dehydrogenase (NADP+) (EC 1.1.1.287) from Gluconobacter oxydans

32% id,
98% cov

More...

Synpcc7942_2467: shikimate 5-dehydrogenase
is similar to:
PaperBLAST

YDIB_ECOLI / P0A6D5: Quinate/shikimate dehydrogenase; NAD-dependent shikimate 5-dehydrogenase; EC 1.1.1.282 from Escherichia coli
YdiB / b1692: quinate/shikimate dehydrogenase (EC 1.1.1.282) from Escherichia coli
ydiB / RF|NP_416207: quinate/shikimate dehydrogenase; EC 1.1.1.282 from Escherichia coli
ydiB / P0A6D5: quinate/shikimate dehydrogenase (EC 1.1.1.282) from Escherichia coli

33% id,
98% cov

Q88K85: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Pseudomonas putida

33% id,
97% cov

A4QB65: shikimate dehydrogenase (NADP+) (EC 1.1.1.25); quinate/shikimate dehydrogenase [NAD(P)+] (EC 1.1.1.282) from Corynebacterium glutamicum

32% id,
97% cov

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Synpcc7942_1719: isocitrate dehydrogenase
is similar to:
PaperBLAST

Q4J6C9: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Sulfolobus acidocaldarius

41% id,
76% cov

Q4J6C9: isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286) from Sulfolobus acidocaldarius

37% id,
54% cov

HICDH_THET2 / Q72IW9: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus
HICDH_THET8 / Q5SIJ1: Isocitrate/homoisocitrate dehydrogenase; Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.286 from Thermus thermophilus

47% id,
36% cov

More...

Synpcc7942_1501: D-3-phosphoglycerate dehydrogenase
is similar to:
PaperBLAST

F8A9V0: D-lactate dehydrogenase (EC 1.1.1.28) from Thermodesulfatator indicus

36% id,
86% cov

O66939: D-lactate dehydrogenase (EC 1.1.1.28) from Aquifex aeolicus

31% id,
92% cov

A0A0M3KL04: D-lactate dehydrogenase (EC 1.1.1.28) from Sporolactobacillus inulinus

33% id,
87% cov

More...

Synpcc7942_1342: GDP-mannose 4,6-dehydratase
is similar to:
PaperBLAST

RMD_ANETH / Q6T1X6: GDP-6-deoxy-D-mannose reductase; EC 1.1.1.281 from Aneurinibacillus thermoaerophilus

30% id,
98% cov

Synpcc7942_0276: glycolate oxidase subunit GlcD
is similar to:
PaperBLAST

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

29% id,
99% cov

A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus

31% id,
88% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

29% id,
78% cov

Synpcc7942_2100: dTDP-glucose 4,6-dehydratase
is similar to:
PaperBLAST

RMD_PSEAE / Q9HTB6: GDP-6-deoxy-D-mannose reductase; EC 1.1.1.281 from Pseudomonas aeruginosa
Q9HTB6: GDP-4-dehydro-6-deoxy-D-mannose reductase (EC 1.1.1.281) from Pseudomonas aeruginosa

27% id,
99% cov

Synpcc7942_0320: UDP-galactose 4-epimerase
is similar to:
PaperBLAST

RMD_ANETH / Q6T1X6: GDP-6-deoxy-D-mannose reductase; EC 1.1.1.281 from Aneurinibacillus thermoaerophilus

25% id,
99% cov

Synpcc7942_0061: CDP-glucose 4,6-dehydratase
is similar to:
PaperBLAST

RMD_PSEAE / Q9HTB6: GDP-6-deoxy-D-mannose reductase; EC 1.1.1.281 from Pseudomonas aeruginosa
Q9HTB6: GDP-4-dehydro-6-deoxy-D-mannose reductase (EC 1.1.1.281) from Pseudomonas aeruginosa

24% id,
95% cov

RMD_ANETH / Q6T1X6: GDP-6-deoxy-D-mannose reductase; EC 1.1.1.281 from Aneurinibacillus thermoaerophilus

23% id,
73% cov

Synpcc7942_1596: short chain dehydrogenase
is similar to:
PaperBLAST

Q7XZH5: xanthoxin dehydrogenase (EC 1.1.1.288) from Oryza sativa

25% id,
90% cov

Q9SCU0: xanthoxin dehydrogenase (EC 1.1.1.288) from Arabidopsis thaliana

26% id,
87% cov

Synpcc7942_1718: glycolate oxidase subunit GlcE
is similar to:
PaperBLAST

A0A0G2K1W9: D-lactate dehydrogenase (EC 1.1.1.28) from Rattus norvegicus

25% id,
86% cov

G4MWZ3: D-lactate dehydrogenase (EC 1.1.1.28) from Pyricularia oryzae

23% id,
67% cov

Q9YEU4: D-lactate dehydrogenase (EC 1.1.1.28); D-lactate dehydrogenase (acceptor) (EC 1.1.99.6) from Aeropyrum pernix

25% id,
57% cov

Synpcc7942_2503: protochlorophyllide oxidoreductase
is similar to:
PaperBLAST

A4PB64: sorbose reductase (EC 1.1.1.289) from Gluconobacter frateurii

32% id,
33% cov

Synpcc7942_B2642: putative zinc-binding oxidoreductase
is similar to:
PaperBLAST

B6T6Q8: S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) from Zea mays

32% id,
28% cov

ADHX_MAIZE / P93629: Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Zea mays

32% id,
28% cov

ADHX_MYXGL / P80360: Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Myxine glutinosa

32% id,
25% cov

More...

Synpcc7942_0216: putative zinc-binding oxidoreductase
is similar to:
PaperBLAST

ADHX_SPAAU / P79896: Alcohol dehydrogenase class-3; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Sparus aurata

38% id,
22% cov

ADHH_GADMO / P81600: Alcohol dehydrogenase class-3 chain H; Alcohol dehydrogenase class-III chain H; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Gadus morhua

35% id,
22% cov

ADHL_GADMO / P81601: Alcohol dehydrogenase class-3 chain L; Alcohol dehydrogenase class-III chain L; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; S-(hydroxymethyl)glutathione dehydrogenase; EC 1.1.1.1; EC 1.1.1.-; EC 1.1.1.284 from Gadus morhua

35% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory