Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 7 curated entries in PaperBLAST's database that match '1.1.1.77' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1653: glycerol dehydrogenase
is similar to:
PaperBLAST

Q9HHR2: glycolaldehyde reductase (EC 1.1.1.77) from Halobacterium salinarum

37% id,
99% cov

Synpcc7942_2285: glycerol dehydrogenase
is similar to:
PaperBLAST

Q9HHR2: glycolaldehyde reductase (EC 1.1.1.77) from Halobacterium salinarum

31% id,
94% cov

Synpcc7942_1160: hypothetical protein
is similar to:
PaperBLAST

YLL056C / Q12177: NADH-dependent aldehyde reductase (EC 1.1.1.77; EC 1.1.1.244; EC 1.1.1.1) from Saccharomyces cerevisiae

29% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory