Searching in Synechococcus elongatus PCC 7942 (SynE)
Found 17 curated entries in PaperBLAST's database that match '1.1.2.3' as complete word(s).
These curated entries have 15 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query
| Synpcc7942_1717: glycolate oxidase subunit (Fe-S) protein is similar to: | PaperBLAST |
DVU_3033 / Q726S3: quinone-dependent L-lactate dehydrogenase large subunit (EC 1.1.2.3) from Desulfovibrio vulgaris | 27% id, 56% cov |
| Synpcc7942_1831: inositol-5-monophosphate dehydrogenase is similar to: | PaperBLAST |
Q9HV37: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas aeruginosa | 28% id, 31% cov |
lldD: L-lactate dehydrogenase [cytochrome]; EC 1.1.2.3 from Escherichia coli | 26% id, 30% cov |
| Synpcc7942_1933: isopentenyl pyrophosphate isomerase is similar to: | PaperBLAST |
Q9HV37: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas aeruginosa | 30% id, 27% cov |
lldD: L-lactate dehydrogenase [cytochrome]; EC 1.1.2.3 from Escherichia coli | 42% id, 15% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 896619-901352 (frame +3) on NC_007604 is similar to: | PaperBLAST |
CYB2_YEAST / P00175: L-lactate dehydrogenase (cytochrome); Cytochrome b2; Flavocytochrome b2; FCB2; L-lactate ferricytochrome c oxidoreductase; L-LCR; EC 1.1.2.3 from Saccharomyces cerevisiae | 25% id, 18% cov |
Lawrence Berkeley National Laboratory