Curated BLAST for Genomes


Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 28 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 22 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1622: probable proteinase
is similar to:

Q9RSJ4: 4-hydroxyphenylpyruvate dioxygenase (EC from Salvia miltiorrhiza

40% id,
98% cov

Synpcc7942_0638: Glyoxalase I
is similar to:

Q09PG8: 4-hydroxyphenylpyruvate dioxygenase (EC from uncultured soil

33% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory