Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 93 curated entries in PaperBLAST's database that match '1.13.11.6'.

These curated entries have 62 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0196: Beta-carotene 15,15'-dioxygenase is similar to:	PaperBLAST
NINAB_GALME / A8Y9I2: Carotenoid isomerooxygenase; Beta-carotene 15,15'-monooxygenase and retinoid isomerase; Beta-carotene dioxygenase and retinoid isomerase; Neither inactivation nor afterpotential mutant B; EC 1.13.11.65 from Galleria mellonella A8Y9I2: carotenoid isomerooxygenase (EC 1.13.11.65) from Galleria mellonella	29% id, 96% cov
Q1GSG1: carotenoid isomerooxygenase (EC 1.13.11.65) from Sphingopyxis alaskensis	30% id, 91% cov
E3T3A2: carlactone synthase (EC 1.13.11.69); all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase (EC 1.13.11.70) from Actinidia chinensis	30% id, 87% cov
C4PJN4: carlactone synthase (EC 1.13.11.69); all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase (EC 1.13.11.70) from Zea mays	29% id, 85% cov
CCD8_ARATH / Q8VY26: Carotenoid cleavage dioxygenase 8, chloroplastic; AtCCD8; AtNCED8; Protein MORE AXILLARY BRANCHING 4; Protein MORE AXILLARY GROWTH 4; EC 1.13.11.69; EC 1.13.11.70 from Arabidopsis thaliana CCD8 / Q8VY26: 10'-apo-β-carotenal 13,14-cleaving dioxygenase (EC 1.13.11.69; EC 1.13.11.70) from Arabidopsis thaliana Q8VY26: carlactone synthase (EC 1.13.11.69); all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase (EC 1.13.11.70) from Arabidopsis thaliana	29% id, 85% cov
CCD8B_ORYSJ / Q8LIY8: Carotenoid cleavage dioxygenase 8 homolog B, chloroplastic; OsCCD8b; Protein DWARF-10; Protein MAX4 homolog; EC 1.13.11.69; EC 1.13.11.70 from Oryza sativa	29% id, 85% cov
BCDO1_HUMAN / Q9HAY6: Beta,beta-carotene 15,15'-dioxygenase; Beta-carotene dioxygenase 1; Beta-carotene oxygenase 1; EC 1.13.11.63 from Homo sapiens BCO1 / Q9HAY6: β,β-carotene 15,15'-dioxygenase monomer (EC 1.13.11.63) from Homo sapiens Q9HAY6: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Homo sapiens	26% id, 91% cov
H0VRY9: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Cavia porcellus	29% id, 64% cov
A1KQY3: torulene dioxygenase (EC 1.13.11.59); 8'-apo-beta-carotenoid 14',13'-cleaving dioxygenase (EC 1.13.11.67) from Fusarium fujikuroi	29% id, 64% cov
CCD7_ORYSJ / Q7XU29: Carotenoid cleavage dioxygenase 7, chloroplastic; OsCCD7; Beta,beta-carotene 9',10'-oxygenase; Protein DWARF-17; Protein HIGH-TILLERING DWARF 1; Protein MAX3 homolog; EC 1.13.11.68 from Oryza sativa	29% id, 62% cov
C7C6F6: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Ovis aries	28% id, 63% cov
BCDO1_CHICK / Q9I993: Beta,beta-carotene 15,15'-dioxygenase; Beta-carotene dioxygenase 1; Beta-carotene oxygenase 1; EC 1.13.11.63 from Gallus gallus BCO1 / Q9I993: β-carotene 15,15′-dioxygenase monomer (EC 1.13.11.63) from Gallus gallus Q9I993: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Gallus gallus	28% id, 62% cov
BCDO1_MOUSE / Q9JJS6: Beta,beta-carotene 15,15'-dioxygenase; Beta-carotene dioxygenase 1; Beta-carotene oxygenase 1; EC 1.13.11.63 from Mus musculus Q9JJS6: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Mus musculus	27% id, 61% cov
G1SEP0: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Oryctolagus cuniculus	29% id, 58% cov
Q91XT5: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Rattus norvegicus	27% id, 61% cov
G3V7N1: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Rattus norvegicus	27% id, 61% cov
NINAB_DROME / Q9VFS2: Carotenoid isomerooxygenase; Beta-carotene 15,15'-monooxygenase and retinoid isomerase; Beta-carotene dioxygenase and retinoid isomerase; Neither inactivation nor afterpotential mutant B; EC 1.13.11.65 from Drosophila melanogaster ninaB / Q9VFS2: carotenoid isomerooxygenase (EC 1.13.11.65) from Drosophila melanogaster Q9VFS2: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63); carotenoid isomerooxygenase (EC 1.13.11.65) from Drosophila melanogaster	27% id, 59% cov
A3KN98: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63); carotenoid-9',10'-cleaving dioxygenase (EC 1.13.11.71) from Rattus norvegicus	23% id, 66% cov
C1L3B1: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63); carotenoid-9',10'-cleaving dioxygenase (EC 1.13.11.71) from Ovis aries	25% id, 59% cov
E3T3A3: 9-cis-beta-carotene 9',10'-cleaving dioxygenase (EC 1.13.11.68); carotenoid-9',10'-cleaving dioxygenase (EC 1.13.11.71) from Actinidia chinensis	27% id, 54% cov
CCD7_ORYSJ / Q7XU29: Carotenoid cleavage dioxygenase 7, chloroplastic; OsCCD7; Beta,beta-carotene 9',10'-oxygenase; Protein DWARF-17; Protein HIGH-TILLERING DWARF 1; Protein MAX3 homolog; EC 1.13.11.68 from Oryza sativa	36% id, 30% cov
C4PJN3: 9-cis-beta-carotene 9',10'-cleaving dioxygenase (EC 1.13.11.68) from Zea mays	35% id, 30% cov
A0A075IEG5: 9-cis-beta-carotene 9',10'-cleaving dioxygenase (EC 1.13.11.68) from Crocus sativus	31% id, 32% cov
C4PJN3: 9-cis-beta-carotene 9',10'-cleaving dioxygenase (EC 1.13.11.68) from Zea mays	35% id, 22% cov
G1SEP0: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Oryctolagus cuniculus	37% id, 19% cov
Q91XT5: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Rattus norvegicus	36% id, 18% cov
G3V7N1: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Rattus norvegicus	36% id, 18% cov
BCDO1_MOUSE / Q9JJS6: Beta,beta-carotene 15,15'-dioxygenase; Beta-carotene dioxygenase 1; Beta-carotene oxygenase 1; EC 1.13.11.63 from Mus musculus Q9JJS6: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Mus musculus	36% id, 18% cov
C7C6F6: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Ovis aries	35% id, 19% cov
P9WPR5: carotenoid isomerooxygenase (EC 1.13.11.65); all-trans-8'-apo-beta-carotenal 15,15'-oxygenase (EC 1.13.11.75) from Mycobacterium tuberculosis	33% id, 19% cov
BCDO1_HUMAN / Q9HAY6: Beta,beta-carotene 15,15'-dioxygenase; Beta-carotene dioxygenase 1; Beta-carotene oxygenase 1; EC 1.13.11.63 from Homo sapiens BCO1 / Q9HAY6: β,β-carotene 15,15'-dioxygenase monomer (EC 1.13.11.63) from Homo sapiens Q9HAY6: beta-carotene 15,15'-dioxygenase (EC 1.13.11.63) from Homo sapiens	33% id, 18% cov
CCD7_ARATH / Q7XJM2: Carotenoid cleavage dioxygenase 7, chloroplastic; AtCCD7; AtNCED7; Beta,beta-carotene 9',10'-oxygenase; Protein MORE AXILLARY BRANCHING 3; Protein MORE AXILLARY GROWTH 3; EC 1.13.11.68 from Arabidopsis thaliana CCD7 / Q7XJM2: 9-cis-β-carotene 9',10'-cleavage dioxygenase (EC 1.13.11.68) from Arabidopsis thaliana Q7XJM2: 9-cis-beta-carotene 9',10'-cleaving dioxygenase (EC 1.13.11.68); carotenoid-9',10'-cleaving dioxygenase (EC 1.13.11.71) from Arabidopsis thaliana	27% id, 22% cov
A0A075IEG5: 9-cis-beta-carotene 9',10'-cleaving dioxygenase (EC 1.13.11.68) from Crocus sativus	28% id, 21% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

196100-197596 (frame -1) on NC_007604 is similar to:	PaperBLAST
P9WPR5: carotenoid isomerooxygenase (EC 1.13.11.65); all-trans-8'-apo-beta-carotenal 15,15'-oxygenase (EC 1.13.11.75) from Mycobacterium tuberculosis Also see hits to annotated proteins above	29% id, 100% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory