Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 155 curated entries in PaperBLAST's database that match '1.14.14.8'.

These curated entries have 121 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1367: cytochrome P450
is similar to:
PaperBLAST

O35728: long-chain fatty acid omega-monooxygenase (EC 1.14.14.80) from Mus musculus

29% id,
78% cov

CP4AE_RAT / P20817: Cytochrome P450 4A14; CYPIVA14; Cytochrome P450-LA-omega 3; Lauric acid omega-hydroxylase; Long-chain fatty acid omega-monooxygenase; EC 1.14.14.80 from Rattus norvegicus
P20817: long-chain fatty acid omega-monooxygenase (EC 1.14.14.80) from Rattus norvegicus

29% id,
78% cov

Q76LL4: flavanoid 3',5'-hydroxylase (EC 1.14.14.81) from Vinca major

27% id,
85% cov

More...

Synpcc7942_0978: ferredoxin-NADP oxidoreductase
is similar to:
PaperBLAST

A0A0A8KYK4: geraniol 8-hydroxylase (EC 1.14.14.83) from Croton stellatopilosus

29% id,
31% cov

Synpcc7942_0473: NADH:flavin oxidoreductase Old Yellow Enzyme family-like
is similar to:
PaperBLAST

A0A0U1WKA6: 4'-methoxyisoflavone 2'-hydroxylase (EC 1.14.14.89) from Slackia sp.

27% id,
33% cov

Synpcc7942_1612: pyridine nucleotide transhydrogenase alpha subunit
is similar to:
PaperBLAST

A0A0U1WKA6: 4'-methoxyisoflavone 2'-hydroxylase (EC 1.14.14.89) from Slackia sp.

24% id,
25% cov

Synpcc7942_1118: mercuric reductase
is similar to:
PaperBLAST

A0A0U1WKA6: 4'-methoxyisoflavone 2'-hydroxylase (EC 1.14.14.89) from Slackia sp.

26% id,
21% cov

Synpcc7942_1512: zeta-carotene desaturase
is similar to:
PaperBLAST

A0A0U1WKA6: 4'-methoxyisoflavone 2'-hydroxylase (EC 1.14.14.89) from Slackia sp.

29% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1405097-1406623 (frame +2) on NC_007604
is similar to:
PaperBLAST

Q52YL8: flavanoid 3',5'-hydroxylase (EC 1.14.14.81) from Delphinium grandiflorum
Also see hits to annotated proteins above

26% id,
91% cov

F2ZAE0: ent-kaurene monooxygenase (EC 1.14.14.86) from Physcomitrella patens
Also see hits to annotated proteins above

23% id,
88% cov

KO1 / Q6UQ67: ent-kaurene oxidase (EC 1.14.14.86) from Stevia rebaudiana
Also see hits to annotated proteins above

21% id,
94% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory