Curated BLAST for Genomes


Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 22 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1847: dihydrodipicolinate synthase
is similar to:

Q3M723: 4-hydroxy-tetrahydrodipicolinate reductase (EC from Trichormus variabilis

62% id,
99% cov

Synpcc7942_2136: dihydrodipicolinate reductase
is similar to:

DAPB_MYCTU / P9WP23: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC from Mycobacterium tuberculosis
dapB / P9WP23: dihydropicolinate reductase subunit (EC from Mycobacterium tuberculosis
P9WP23: 4-hydroxy-tetrahydrodipicolinate reductase (EC from Mycobacterium tuberculosis

44% id,
98% cov

dapB / P42976: dihydrodipicolinate reductase subunit (EC from Bacillus subtilis

42% id,
98% cov

dapB / P40110: dihydropicolinate reductase subunit (EC from Corynebacterium glutamicum
P40110: 4-hydroxy-tetrahydrodipicolinate reductase (EC from Corynebacterium glutamicum

39% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory