Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 101 curated entries in PaperBLAST's database that match '1.2.1.10'.

These curated entries have 73 distinct sequences.

Running ublast with E ≤ 0.01

Found 23 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0143: pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component
is similar to:
PaperBLAST

P73405: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Synechocystis sp.

85% id,
100% cov

Q38799: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Arabidopsis thaliana

49% id,
89% cov

Q9D051: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104) from Mus musculus

47% id,
90% cov

More...

Synpcc7942_1944: Pyruvate dehydrogenase (lipoamide)
is similar to:
PaperBLAST

P74490: pyruvate dehydrogenase system (subunit 2/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 2/2) (EC 1.2.4.1) from Synechocystis sp.

78% id,
100% cov

G3H5K6: pyruvate dehydrogenase system (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (EC 1.2.4.1) from Cricetulus griseus

40% id,
81% cov

P35486: pyruvate dehydrogenase system (subunit 2/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (EC 1.2.4.1) from Mus musculus

40% id,
81% cov

More...

Synpcc7942_1939: glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

gap3 / A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa
A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa

63% id,
99% cov

Synpcc7942_1742: glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

gap3 / A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa
A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa

45% id,
99% cov

Synpcc7942_0245: glyceraldehyde-3-phosphate dehydrogenase
is similar to:
PaperBLAST

gap3 / A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa
A0A071L3D0: glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) (EC 1.2.1.107) from Pseudomonas aeruginosa

44% id,
98% cov

Synpcc7942_1433: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

lysY / Q4JAQ3: [amino-group carrier protein]-L-2-aminoadipate/[amino-group carrier protein]-L-glutamate phosphate reductase (EC 1.2.1.103; EC 1.2.1.106) from Sulfolobus acidocaldarius
Q4JAQ3: [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC 1.2.1.106) from Sulfolobus acidocaldarius

37% id,
99% cov

LYSY_THET2 / O50146: [LysW]-L-2-aminoadipate 6-phosphate reductase; EC 1.2.1.103 from Thermus thermophilus
lysY / O50146: [amino-group carrier protein]-L-2-aminoadipate 6-phosphate reductase (EC 1.2.1.103) from Thermus thermophilus
O50146: [amino group carrier protein]-6-phospho-L-2-aminoadipate reductase (EC 1.2.1.103); [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC 1.2.1.106) from Thermus thermophilus

35% id,
97% cov

Q5JFW1: [amino-group carrier protein]-5-phospho-L-glutamate reductase (EC 1.2.1.106) from Thermococcus kodakarensis

34% id,
98% cov

Synpcc7942_1198: dihydrolipoamide dehydrogenase
is similar to:
PaperBLAST

Q8NTE1: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105) from Corynebacterium glutamicum

35% id,
98% cov

P09622: pyruvate dehydrogenase system (subunit 1/5) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (subunit 1/4) (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4); dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) from Homo sapiens
A0A024R713: 2-oxoglutarate dehydrogenase system (subunit 3/3) (EC 1.2.1.105) from Homo sapiens

37% id,
91% cov

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

35% id,
92% cov

More...

Synpcc7942_1118: mercuric reductase
is similar to:
PaperBLAST

pdhD / P75393: pyruvate dehydrogenase complex E3 component (EC 1.2.1.104) from Mycoplasma pneumoniae

32% id,
100% cov

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

31% id,
91% cov

Q8NTE1: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105) from Corynebacterium glutamicum

29% id,
97% cov

More...

Synpcc7942_1068: branched-chain alpha-keto acid dehydrogenase subunit E2
is similar to:
PaperBLAST

P20285: pyruvate dehydrogenase system (EC 1.2.1.104) from Neurospora crassa

33% id,
92% cov

O00330: pyruvate dehydrogenase system (subunit 3/5) (EC 1.2.1.104) from Homo sapiens

31% id,
88% cov

P0AFG6: 2-oxoglutarate dehydrogenase system (EC 1.2.1.105); dihydrolipoyllysine-residue succinyltransferase (EC 2.3.1.61) from Escherichia coli

27% id,
99% cov

More...

Synpcc7942_0842: glutathione reductase
is similar to:
PaperBLAST

Q8NTE1: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105) from Corynebacterium glutamicum

30% id,
97% cov

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

29% id,
94% cov

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

30% id,
90% cov

More...

Synpcc7942_0139: acetolactate synthase 3 catalytic subunit
is similar to:
PaperBLAST

D9J047: pyruvate dehydrogenase system (EC 1.2.1.104); pyruvate decarboxylase (EC 4.1.1.1) from Zymomonas mobilis

23% id,
97% cov

Synpcc7942_0430: 1-deoxy-D-xylulose-5-phosphate synthase
is similar to:
PaperBLAST

P73405: pyruvate dehydrogenase system (subunit 1/2) (EC 1.2.1.104); pyruvate dehydrogenase (acetyl-transferring) (subunit 1/2) (EC 1.2.4.1) from Synechocystis sp.

25% id,
78% cov

Synpcc7942_2002: hypothetical protein
is similar to:
PaperBLAST

AF123459 / Q9XYS5: dihydrolipoyl dehydrogenase-binding protein (EC 1.2.1.104) from Ascaris suum

31% id,
20% cov

Synpcc7942_0912: DNA polymerase III, tau subunit
is similar to:
PaperBLAST

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

38% id,
12% cov

Synpcc7942_0431: hypothetical protein
is similar to:
PaperBLAST

Q8NTE1: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105) from Corynebacterium glutamicum

38% id,
11% cov

Synpcc7942_0946: UDP-galactopyranose mutase
is similar to:
PaperBLAST

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

42% id,
10% cov

Synpcc7942_0623: thioredoxin reductase
is similar to:
PaperBLAST

pdhD / P75393: pyruvate dehydrogenase complex E3 component (EC 1.2.1.104) from Mycoplasma pneumoniae

47% id,
8% cov

Synpcc7942_2517: hypothetical protein
is similar to:
PaperBLAST

DLAT / F1KT84: dihydrolipoyllysine-residue acetyltransferase (EC 1.2.1.104) from Ascaris suum

32% id,
11% cov

Synpcc7942_1140: hypothetical protein
is similar to:
PaperBLAST

P31023: pyruvate dehydrogenase system (subunit 1/3) (EC 1.2.1.104); glycine cleavage system (subunit 4/4) (EC 1.4.1.27) from Pisum sativum

41% id,
9% cov

Synpcc7942_0369: putative flavin-containing monoamine oxidase
is similar to:
PaperBLAST

P0A9P0: pyruvate dehydrogenase system (EC 1.2.1.104); 2-oxoglutarate dehydrogenase system (subunit 1/3) (EC 1.2.1.105); glycine cleavage system (EC 1.4.1.27); dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

40% id,
9% cov

Synpcc7942_0878: ribonuclease, Rne/Rng family
is similar to:
PaperBLAST

P10515: pyruvate dehydrogenase system (subunit 2/5) (EC 1.2.1.104) from Homo sapiens

30% id,
12% cov

Synpcc7942_0866: hypothetical protein
is similar to:
PaperBLAST

P10515: pyruvate dehydrogenase system (subunit 2/5) (EC 1.2.1.104) from Homo sapiens

31% id,
11% cov

Synpcc7942_2564: biotin carboxyl carrier protein
is similar to:
PaperBLAST

Q0WQF7: pyruvate dehydrogenase system (subunit 2/2) (EC 1.2.1.104) from Arabidopsis thaliana

35% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2070954-2072039 (frame +3) on NC_007604
is similar to:
PaperBLAST

AF123459 / Q9XYS5: dihydrolipoyl dehydrogenase-binding protein (EC 1.2.1.104) from Ascaris suum
Also see hits to annotated proteins above

25% id,
32% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory