Curated BLAST for Genomes


Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 24 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1848: aspartate-semialdehyde dehydrogenase
is similar to:

asd / Q04797: aspartate semialdehyde dehydrogenase subunit (EC from Bacillus subtilis

47% id,
99% cov

AT1G14810 / Q8VYI4: aspartate semialdehyde dehydrogenase (EC from Arabidopsis thaliana

49% id,
93% cov

DHAS2_VIBCH / P23247: Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC from Vibrio cholerae

46% id,
99% cov


Synpcc7942_1433: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:

DHAS_METJA / Q57658: Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC from Methanocaldococcus jannaschii
asd / Q57658: aspartate-semialdehyde dehydrogenase monomer (EC from Methanocaldococcus jannaschii

27% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory