Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 157 curated entries in PaperBLAST's database that match '1.2.1.3'.

These curated entries have 118 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0489: aldehyde dehydrogenase
is similar to:
PaperBLAST

Q3UNF5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

49% id,
96% cov

AL3H1_ARATH / Q70DU8: Aldehyde dehydrogenase family 3 member H1; AtALDH4; Ath-ALDH4; EC 1.2.1.3 from Arabidopsis thaliana
Q70DU8: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Arabidopsis thaliana

48% id,
94% cov

AL3B2_HUMAN / P48448: Aldehyde dehydrogenase family 3 member B2; Aldehyde dehydrogenase 8; EC 1.2.1.3 from Homo sapiens

46% id,
95% cov

More...

Synpcc7942_1433: N-acetyl-gamma-glutamyl-phosphate reductase
is similar to:
PaperBLAST

ARGC_GEOSE / Q07906: N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Geobacillus stearothermophilus

43% id,
100% cov

P9WPZ9: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) from Mycobacterium tuberculosis

39% id,
97% cov

ARGC_ECOLI / P11446: N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Escherichia coli
ArgC / b3958: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Escherichia coli
argC / P11446: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Escherichia coli
P11446: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) from Escherichia coli

37% id,
98% cov

More...

Synpcc7942_1496: acetylglutamate kinase
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae

33% id,
30% cov

arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

33% id,
24% cov

Synpcc7942_0918: long-chain-fatty-acid CoA ligase
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

29% id,
23% cov

B2HN69: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

23% id,
28% cov

B2HN69: aryl-aldehyde dehydrogenase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

26% id,
23% cov

More...

Synpcc7942_1352: acetyl-CoA synthetase
is similar to:
PaperBLAST

LYS2_YEAST / P07702: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Saccharomyces cerevisiae

24% id,
21% cov

Q8NJ21: L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Kluyveromyces lactis

24% id,
21% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory