Curated BLAST for Genomes


Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 21 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0489: aldehyde dehydrogenase
is similar to:

A0A0D5YDF1: succinate-semialdehyde dehydrogenase (NADP+) (EC from Acinetobacter baumannii

29% id,
92% cov

GABD_ECOLI / P25526: Succinate-semialdehyde dehydrogenase [NADP(+)] GabD; SSDH; Glutarate-semialdehyde dehydrogenase; EC; EC 1.2.1.- from Escherichia coli
GabD / b2661: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC from Escherichia coli
gabD / P25526: succinate-semialdehyde dehydrogenase (NADP+) GabD (EC; EC from Escherichia coli
P25526: succinate-semialdehyde dehydrogenase (NADP+) (EC from Escherichia coli

29% id,
90% cov

gabD / Q9RBF6: NADP-dependent succinate semialdehyde dehydrogenase (EC from Cupriavidus necator
Q9RBF6: succinate-semialdehyde dehydrogenase [NAD(P)+] (EC; succinate-semialdehyde dehydrogenase (NADP+) (EC from Cupriavidus necator

29% id,
89% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory