Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 45 curated entries in PaperBLAST's database that match '1.3.1.12'.

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0684: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

CHCA_STRCU / P95727: 1-cyclohexenylcarbonyl-CoA reductase; Cyclohexane-1-carbonyl-CoA reductase (NADP(+)); EC 1.3.1.120 from Streptomyces collinus
chcA / P95727: cyclohexane-1-carbonyl-CoA dehydrogenase monomer (EC 1.3.1.120) from Streptomyces collinus
P95727: cyclohexane-1-carbonyl-CoA reductase (NADP+) (EC 1.3.1.120) from Streptomyces collinus

37% id,
86% cov

DECR2_ARATH / Q9LTV6: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; EC 1.3.1.124 from Arabidopsis thaliana

30% id,
85% cov

DECR2_MOUSE / Q9WV68: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; 2,4-dienoyl-CoA reductase 2; EC 1.3.1.124 from Mus musculus
Q9WV68: 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] (EC 1.3.1.124) from Mus musculus

29% id,
85% cov

Synpcc7942_0660: arogenate dehydrogenase
is similar to:
PaperBLAST

TYRA_MYCTU / O69721: Prephenate dehydrogenase; PDH; EC 1.3.1.12 from Mycobacterium tuberculosis

34% id,
84% cov

TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis

30% id,
95% cov

Q8DUW0: prephenate dehydrogenase (EC 1.3.1.12) from Streptococcus mutans

34% id,
76% cov

More...

Synpcc7942_1573: 3-oxoacyl-(acyl-carrier protein) reductase
is similar to:
PaperBLAST

CHCA_STRCU / P95727: 1-cyclohexenylcarbonyl-CoA reductase; Cyclohexane-1-carbonyl-CoA reductase (NADP(+)); EC 1.3.1.120 from Streptomyces collinus
chcA / P95727: cyclohexane-1-carbonyl-CoA dehydrogenase monomer (EC 1.3.1.120) from Streptomyces collinus
P95727: cyclohexane-1-carbonyl-CoA reductase (NADP+) (EC 1.3.1.120) from Streptomyces collinus

32% id,
87% cov

DECR2_ARATH / Q9LTV6: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; EC 1.3.1.124 from Arabidopsis thaliana

32% id,
85% cov

SPS19_YEAST / P32573: Peroxisomal 2,4-dienoyl-CoA reductase SPS19 [(3E)-enoyl-CoA-producing]; Sporulation-specific protein SPX19; EC 1.3.1.124 from Saccharomyces cerevisiae
SPS19 / P32573: 2,4-dienoyl-CoA reductase (EC 1.3.1.124) from Saccharomyces cerevisiae
P32573: 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] (EC 1.3.1.124) from Saccharomyces cerevisiae

31% id,
85% cov

More...

Synpcc7942_0126: enoyl-(acyl carrier protein) reductase
is similar to:
PaperBLAST

CHCA_STRCU / P95727: 1-cyclohexenylcarbonyl-CoA reductase; Cyclohexane-1-carbonyl-CoA reductase (NADP(+)); EC 1.3.1.120 from Streptomyces collinus
chcA / P95727: cyclohexane-1-carbonyl-CoA dehydrogenase monomer (EC 1.3.1.120) from Streptomyces collinus
P95727: cyclohexane-1-carbonyl-CoA reductase (NADP+) (EC 1.3.1.120) from Streptomyces collinus

29% id,
87% cov

DECR2_RAT / Q9Z2M4: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; 2,4-dienoyl-CoA reductase 2; DCR-AKL; pVI-AKL; EC 1.3.1.124 from Rattus norvegicus
Q9Z2M4: 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] (EC 1.3.1.124) from Rattus norvegicus

29% id,
84% cov

DECR2_HUMAN / Q9NUI1: Peroxisomal 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing]; pDCR; 2,4-dienoyl-CoA reductase 2; Short chain dehydrogenase/reductase family 17C member 1; EC 1.3.1.124 from Homo sapiens
Q9NUI1: 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] (EC 1.3.1.124) from Homo sapiens

29% id,
84% cov

More...

Synpcc7942_1068: branched-chain alpha-keto acid dehydrogenase subunit E2
is similar to:
PaperBLAST

P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli

29% id,
65% cov

Synpcc7942_1596: short chain dehydrogenase
is similar to:
PaperBLAST

Q64591: 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] (EC 1.3.1.124) from Rattus norvegicus

25% id,
57% cov

DECR_HUMAN / Q16698: 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing], mitochondrial; 2,4-dienoyl-CoA reductase [NADPH]; 4-enoyl-CoA reductase [NADPH]; Short chain dehydrogenase/reductase family 18C member 1; EC 1.3.1.124 from Homo sapiens
Q16698: 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] (EC 1.3.1.124) from Homo sapiens

24% id,
57% cov

Q9CQ62: 2,4-dienoyl-CoA reductase [(3E)-enoyl-CoA-producing] (EC 1.3.1.124) from Mus musculus

25% id,
55% cov

Synpcc7942_0881: prephenate dehydratase
is similar to:
PaperBLAST

O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus

32% id,
42% cov

Synpcc7942_0473: NADH:flavin oxidoreductase Old Yellow Enzyme family-like
is similar to:
PaperBLAST

ard / P0DW92: acrylate reductase (EC 1.3.1.125) from Vibrio harveyi

31% id,
31% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1079427-1080767 (frame +3) on NC_007604
is similar to:
PaperBLAST

P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli
Also see hits to annotated proteins above

28% id,
33% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory