Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 23 curated entries in PaperBLAST's database that match '1.4.3.3' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_2406: FAD dependent oxidoreductase
is similar to:
PaperBLAST

thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis

32% id,
97% cov

Synpcc7942_1677: hypothetical protein
is similar to:
PaperBLAST

thiO / O31616: glycine oxidase monomer (EC 1.4.3.19; EC 1.4.3.3) from Bacillus subtilis

26% id,
92% cov

Synpcc7942_0946: UDP-galactopyranose mutase
is similar to:
PaperBLAST

Q6R4Q9: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis

59% id,
8% cov

Q99042: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis

59% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory