Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 47 curated entries in PaperBLAST's database that match '2.1.1.13'.

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1854: precorrin-3 methyltransferase
is similar to:
PaperBLAST

Q9R9K1: precorrin-3B C17-methyltransferase (EC 2.1.1.131) from Paracoccus denitrificans

51% id,
98% cov

cobJ / P21640: precorrin-3B (C17)-methyltransferase (EC 2.1.1.131) from Sinorhizobium sp.

47% id,
97% cov

Synpcc7942_1850: precorrin-6Y C5,15-methyltransferase (decarboxylating)
is similar to:
PaperBLAST

GI|151177: precorrin-6Y C(5,15)-methyltransferase (decarboxylating); EC 2.1.1.132 from Pseudomonas denitrificans
cobL / P21921: precorrin-6B (C5,15) methyltransferase subunit (EC 2.1.1.132) from Sinorhizobium sp.

49% id,
97% cov

Synpcc7942_1372: methionine synthase (B12-dependent)
is similar to:
PaperBLAST

metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum

46% id,
99% cov

METH_ECOLI / P13009: Methionine synthase; 5-methyltetrahydrofolate--homocysteine methyltransferase; Methionine synthase, vitamin-B12-dependent; MS; EC 2.1.1.13 from Escherichia coli
MetH / b4019: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli
metH: methionine synthase; EC 2.1.1.13 from Escherichia coli
metH / P13009: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli

33% id,
96% cov

METH_HUMAN / Q99707: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Homo sapiens
MTR / Q99707: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Homo sapiens
Q99707: methionine synthase (EC 2.1.1.13) from Homo sapiens

32% id,
95% cov

More...

Synpcc7942_1229: precorrin-4 C11-methyltransferase
is similar to:
PaperBLAST

cobM / P21922: precorrin-4 (C11)-methyltransferase (EC 2.1.1.133) from Sinorhizobium sp.
P21922: precorrin-4 C11-methyltransferase (EC 2.1.1.133) from Pseudomonas denitrificans

39% id,
98% cov

cobI / P21639: CobI (EC 2.1.1.130) from Sinorhizobium sp.

28% id,
95% cov

Synpcc7942_1853: cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase
is similar to:
PaperBLAST

cobI / P21639: CobI (EC 2.1.1.130) from Sinorhizobium sp.

37% id,
96% cov

Synpcc7942_0271: uroporphyrinogen-III C-methyltransferase
is similar to:
PaperBLAST

cobI / P21639: CobI (EC 2.1.1.130) from Sinorhizobium sp.

27% id,
96% cov

Synpcc7942_2610: uroporphyrin-III C-methyltransferase
is similar to:
PaperBLAST

cobM / P21922: precorrin-4 (C11)-methyltransferase (EC 2.1.1.133) from Sinorhizobium sp.
P21922: precorrin-4 C11-methyltransferase (EC 2.1.1.133) from Pseudomonas denitrificans

27% id,
91% cov

cobI / P21639: CobI (EC 2.1.1.130) from Sinorhizobium sp.

27% id,
82% cov

Synpcc7942_0596: delta(24)-sterol C-methyltransferase
is similar to:
PaperBLAST

staMB / Q83WF7: 3'-O-demethyl-staurosporine methyltransferase (EC 2.1.1.139) from Streptomyces sp.

35% id,
61% cov

Synpcc7942_0241: 23S rRNA (uracil-5-)-methyltransferase RumA
is similar to:
PaperBLAST

ARSM_METAC / Q8TJK1: Arsenite methyltransferase; As(III) methyltransferase; EC 2.1.1.137 from Methanosarcina acetivorans

35% id,
47% cov

Synpcc7942_1408: membrane-associated protein
is similar to:
PaperBLAST

staMB / Q83WF7: 3'-O-demethyl-staurosporine methyltransferase (EC 2.1.1.139) from Streptomyces sp.

31% id,
48% cov

Synpcc7942_1330: hypothetical protein
is similar to:
PaperBLAST

staMB / Q83WF7: 3'-O-demethyl-staurosporine methyltransferase (EC 2.1.1.139) from Streptomyces sp.

30% id,
48% cov

Synpcc7942_0706: precorrin-6B methylase
is similar to:
PaperBLAST

GI|151177: precorrin-6Y C(5,15)-methyltransferase (decarboxylating); EC 2.1.1.132 from Pseudomonas denitrificans
cobL / P21921: precorrin-6B (C5,15) methyltransferase subunit (EC 2.1.1.132) from Sinorhizobium sp.

37% id,
33% cov

Synpcc7942_1099: ubiquinone/menaquinone biosynthesis methyltransferase
is similar to:
PaperBLAST

staMB / Q83WF7: 3'-O-demethyl-staurosporine methyltransferase (EC 2.1.1.139) from Streptomyces sp.

33% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory