Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 1 curated entries in PaperBLAST's database that match '2.3.1.182'.

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1410: 2-isopropylmalate synthase
is similar to:
PaperBLAST

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

32% id,
100% cov

Synpcc7942_0428: putative alpha-isopropylmalate/homocitrate synthase family transferase
is similar to:
PaperBLAST

BT1858: (R)-citramalate synthase (EC 2.3.1.182) from Bacteroides thetaiotaomicron

27% id,
98% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory