Curated BLAST
Searching in Synechococcus elongatus PCC 7942 (SynE)
Found 22 curated entries in PaperBLAST's database that match '2.3.3.14' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query
Synpcc7942_1410: 2-isopropylmalate synthase
is similar to: | PaperBLAST |
D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus | 49% id,
95% cov |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii | 41% id,
90% cov |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 36% id,
98% cov |
NIFV_AZOVI / P05342: Homocitrate synthase; EC 2.3.3.14 from Azotobacter vinelandii
nifV / P05342: homocitrate synthase monomer (EC 2.3.3.14) from Azotobacter vinelandii | 36% id,
98% cov |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 35% id,
92% cov |
A0A1Y6KBA1: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 36% id,
91% cov |
HOSA_SULTO / Q971S5: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfurisphaera tokodaii | 31% id,
99% cov |
HOSA_SULAC / Q4J989: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfolobus acidocaldarius
Q4J989: homocitrate synthase (EC 2.3.3.14) from Sulfolobus acidocaldarius | 31% id,
95% cov |
HOSA_THET2 / O87198: Homocitrate synthase; HCS; EC 2.3.3.14 from Thermus thermophilus
hcs / O87198: homocitrate synthase (EC 2.3.3.14) from Thermus thermophilus | 29% id,
98% cov |
HOSC_YEAST / P48570: Homocitrate synthase, cytosolic isozyme; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae
LYS20 / P48570: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
P48570: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae | 28% id,
96% cov |
HOSM_SCHPO / Q9Y823: Homocitrate synthase, mitochondrial; HCS; EC 2.3.3.14 from Schizosaccharomyces pombe
lys4 / RF|NP_596458.1: homocitrate synthase (predicted); EC 2.3.3.14 from Schizosaccharomyces pombe | 29% id,
87% cov |
HOSM_YEAST / Q12122: Homocitrate synthase, mitochondrial; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae
LYS21 / Q12122: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
Q12122: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae | 29% id,
83% cov |
M1U949: homocitrate synthase (EC 2.3.3.14) from Flammulina velutipes | 29% id,
80% cov |
C7C437: homocitrate synthase (EC 2.3.3.14) from Aspergillus fumigatus | 28% id,
80% cov |
More... |
Synpcc7942_0428: putative alpha-isopropylmalate/homocitrate synthase family transferase
is similar to: | PaperBLAST |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii | 33% id,
87% cov |
HOSA_THET2 / O87198: Homocitrate synthase; HCS; EC 2.3.3.14 from Thermus thermophilus
hcs / O87198: homocitrate synthase (EC 2.3.3.14) from Thermus thermophilus | 29% id,
98% cov |
D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus | 28% id,
95% cov |
NIFV_AZOVI / P05342: Homocitrate synthase; EC 2.3.3.14 from Azotobacter vinelandii
nifV / P05342: homocitrate synthase monomer (EC 2.3.3.14) from Azotobacter vinelandii | 28% id,
91% cov |
HOSA_SULTO / Q971S5: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfurisphaera tokodaii | 27% id,
93% cov |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 28% id,
89% cov |
A0A1Y6KBA1: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp. | 28% id,
89% cov |
HOSA_SULAC / Q4J989: Homocitrate synthase; HCS; EC 2.3.3.14 from Sulfolobus acidocaldarius
Q4J989: homocitrate synthase (EC 2.3.3.14) from Sulfolobus acidocaldarius | 30% id,
75% cov |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 36% id,
52% cov |
HOSM_SCHPO / Q9Y823: Homocitrate synthase, mitochondrial; HCS; EC 2.3.3.14 from Schizosaccharomyces pombe
lys4 / RF|NP_596458.1: homocitrate synthase (predicted); EC 2.3.3.14 from Schizosaccharomyces pombe | 27% id,
60% cov |
M1U949: homocitrate synthase (EC 2.3.3.14) from Flammulina velutipes | 28% id,
51% cov |
P58637: homocitrate synthase (EC 2.3.3.14) from Nostoc sp. | 49% id,
12% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
1461955-1463604 (frame -2) on NC_007604
is similar to: | PaperBLAST |
D0VY45: homocitrate synthase (EC 2.3.3.14) from Lotus japonicus
Also see hits to annotated proteins above | 49% id,
99% cov |
AKSA_METJA / Q57926: Homocitrate synthase AksA; (R)-homo(2)citrate synthase; (R)-homo(3)citrate synthase; EC 2.3.3.14; EC 2.3.3.- from Methanocaldococcus jannaschii
Also see hits to annotated proteins above | 40% id,
95% cov |
A0A0S6UXF5: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp.
Also see hits to annotated proteins above | 35% id,
96% cov |
A0A1Y6KBA1: homocitrate synthase (EC 2.3.3.14) from Bradyrhizobium sp.
Also see hits to annotated proteins above | 35% id,
94% cov |
HOSC_YEAST / P48570: Homocitrate synthase, cytosolic isozyme; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae
LYS20 / P48570: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
P48570: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
Also see hits to annotated proteins above | 28% id,
97% cov |
HOSM_SCHPO / Q9Y823: Homocitrate synthase, mitochondrial; HCS; EC 2.3.3.14 from Schizosaccharomyces pombe
lys4 / RF|NP_596458.1: homocitrate synthase (predicted); EC 2.3.3.14 from Schizosaccharomyces pombe
Also see hits to annotated proteins above | 29% id,
92% cov |
HOSM_YEAST / Q12122: Homocitrate synthase, mitochondrial; HCS; EC 2.3.3.14 from Saccharomyces cerevisiae
LYS21 / Q12122: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
Q12122: homocitrate synthase (EC 2.3.3.14) from Saccharomyces cerevisiae
Also see hits to annotated proteins above | 29% id,
86% cov |
M1U949: homocitrate synthase (EC 2.3.3.14) from Flammulina velutipes
Also see hits to annotated proteins above | 30% id,
81% cov |
C7C437: homocitrate synthase (EC 2.3.3.14) from Aspergillus fumigatus
Also see hits to annotated proteins above | 28% id,
83% cov |
More... |
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory