Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 107 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).

These curated entries have 69 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0808: HAD-superfamily hydrolase subfamily IIB
is similar to:
PaperBLAST

BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13)

38% id,
53% cov

SUS_DENA2 / D4H6M0: Sucrose synthase; SuSyDa; EC 2.4.1.13 from Denitrovibrio acetiphilus
ADD69694.1: sucrose synthase (SuSyDa;Dacet_2944) (EC 2.4.1.13)
D4H6M0: sucrose synthase (EC 2.4.1.13) from Denitrovibrio acetiphilus

28% id,
67% cov

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

29% id,
62% cov

More...

Synpcc7942_0986: probable glycosyltransferase
is similar to:
PaperBLAST

SUS5_ARATH / F4K5W8: Sucrose synthase 5; AtSUS5; Sucrose-UDP glucosyltransferase 5; EC 2.4.1.13 from Arabidopsis thaliana
SUS5 / F4K5W8: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana
F4K5W8: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana

22% id,
42% cov

BAA01108.1: sucrose synthase (Ss1) (EC 2.4.1.13)

23% id,
38% cov

CAC32462.1: sucrose synthase 3 (Sus3) (EC 2.4.1.13)
Q9AVR8: sucrose synthase (EC 2.4.1.13) from Pisum sativum

24% id,
36% cov

More...

Synpcc7942_1918: UDP-glucose:tetrahydrobiopterin glucosyltransferase
is similar to:
PaperBLAST

SUS_NITEU / Q820M5: Sucrose synthase; SuSyNe; EC 2.4.1.13 from Nitrosomonas europaea
CAD85125.1: sucrose synthase (Ss2;SuSyNe;NE1214) (EC 2.4.1.13)
Q820M5: sucrose synthase (EC 2.4.1.13) from Nitrosomonas europaea

26% id,
30% cov

SUS_THEVB / Q8DK23: Sucrose synthase; SuSyTe; EC 2.4.1.13 from Thermosynechococcus vestitus
BAC08600.1: ADP-Glc: sucrose synthase (SusA;Te-SuS;Tlr1047) (EC 2.4.1.13)

27% id,
21% cov

CAA76057.1: sucrose synthase isoform II (Susy*Dc2) (EC 2.4.1.13)
O49845: sucrose synthase (EC 2.4.1.13) from Daucus carota

34% id,
17% cov

More...

Synpcc7942_0579: sulfolipid sulfoquinovosyldiacylglycerol biosynthesis protein
is similar to:
PaperBLAST

SUS_ACICK / A0A059ZV61: Sucrose synthase; SuSyAc; EC 2.4.1.13 from Acidithiobacillus caldus
AIA55343.1: sucrose synthase (SuSyAc;Acaty_c1477) (EC 2.4.1.13)
A0A059ZV61: sucrose synthase (EC 2.4.1.13) from Acidithiobacillus caldus

27% id,
28% cov

BAB10337.1: At5g49190/K21P3.6 (sucrose synthase;Sus2) (EC 2.4.1.13)

25% id,
27% cov

SUS2_ARATH / Q00917: Sucrose synthase 2; AtSUS2; Sucrose-UDP glucosyltransferase 2; EC 2.4.1.13 from Arabidopsis thaliana
Q00917: sucrose synthase (EC 2.4.1.13) from Arabidopsis thaliana

25% id,
27% cov

More...

Synpcc7942_0388: probable glycosyltransferase
is similar to:
PaperBLAST

SUS_THEVB / Q8DK23: Sucrose synthase; SuSyTe; EC 2.4.1.13 from Thermosynechococcus vestitus
BAC08600.1: ADP-Glc: sucrose synthase (SusA;Te-SuS;Tlr1047) (EC 2.4.1.13)

29% id,
25% cov

G1FNX7: sucrose synthase (EC 2.4.1.13) from Gossypium hirsutum

26% id,
27% cov

CAA76057.1: sucrose synthase isoform II (Susy*Dc2) (EC 2.4.1.13)
O49845: sucrose synthase (EC 2.4.1.13) from Daucus carota

24% id,
29% cov

More...

Synpcc7942_2028: probable glycosyltransferase
is similar to:
PaperBLAST

SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus
AFN74551.1: sucrose synthase (SuSyMr;MROS_1314) (EC 2.4.1.13)
I7A3T6: sucrose synthase (EC 2.4.1.13) from Melioribacter roseus

25% id,
23% cov

BAB20799.1: sucrose synthase 1 (Sus1;PypSUS1) (EC 2.4.1.13)

28% id,
21% cov

BAA88905.1: sucrose synthase (CitSUS1) (EC 2.4.1.13)

27% id,
21% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory