Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 197 curated entries in PaperBLAST's database that match '2.4.2.1'.

These curated entries have 142 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_2123: anthranilate phosphoribosyltransferase
is similar to:		 PaperBLAST

TRPD2_NOSS1 / Q8YXQ9: Anthranilate phosphoribosyltransferase 2; EC 2.4.2.18 from Nostoc sp.

 59% id,
99% cov

TRPD_THET8 / Q5SH88: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus
TRPD_THETH / P83827: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Thermus thermophilus

 44% id,
99% cov

TRPD_XANCP / Q8PD71: Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Xanthomonas campestris

 42% id,
97% cov

More...

Synpcc7942_0923: 5'-methylthioadenosine phosphorylase
is similar to:		 PaperBLAST

flB / Q1EMV9: 5'-fluoro-5'-deoxy-adenosine phosphorylase (EC 2.4.2.1) from Streptantibioticus cattleyicolor

 51% id,
94% cov

Q97W94: purine-nucleoside phosphorylase (EC 2.4.2.1); S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Saccharolobus solfataricus

 44% id,
98% cov

pnp / Q5JEQ6: adenosine phosphorylase (EC 2.4.2.1) from Thermococcus kodakarensis

 46% id,
91% cov

More...

Synpcc7942_0004: amidophosphoribosyltransferase
is similar to:		 PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 46% id,
96% cov

PUR1_CHICK / P28173: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPAT; EC 2.4.2.14 from Gallus gallus

 42% id,
98% cov

PUR1_DROME / Q27601: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPAT; Phosphoribosylamidotransferase; PRAT; EC 2.4.2.14 from Drosophila melanogaster

 43% id,
90% cov

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Synpcc7942_0206: hypothetical protein
is similar to:		 PaperBLAST

NAMPT_HUMAN / P43490: Nicotinamide phosphoribosyltransferase; NAmPRTase; Nampt; Pre-B-cell colony-enhancing factor 1; Pre-B cell-enhancing factor; Visfatin; EC 2.4.2.12 from Homo sapiens
P43490: nicotinamide phosphoribosyltransferase (EC 2.4.2.12) from Homo sapiens

 44% id,
97% cov

NAMPT_MOUSE / Q99KQ4: Nicotinamide phosphoribosyltransferase; NAmPRTase; Nampt; Pre-B-cell colony-enhancing factor 1 homolog; PBEF; Visfatin; EC 2.4.2.12 from Mus musculus
Q99KQ4: nicotinamide phosphoribosyltransferase (EC 2.4.2.12) from Mus musculus

 43% id,
97% cov

NAMPT_RAT / Q80Z29: Nicotinamide phosphoribosyltransferase; NAmPRTase; Nampt; Pre-B-cell colony-enhancing factor 1 homolog; PBEF; Visfatin; EC 2.4.2.12 from Rattus norvegicus

 43% id,
97% cov

More...

Synpcc7942_0951: nicotinate-nucleotide pyrophosphorylase
is similar to:		 PaperBLAST

Q5XBL7: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Streptococcus pyogenes

 43% id,
93% cov

NADC_SALTY / P30012: Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Quinolinate phosphoribosyltransferase [decarboxylating]; QAPRTase; EC 2.4.2.19 from Salmonella typhimurium

 43% id,
90% cov

Q1J647: nicotinate-nucleotide diphosphorylase (carboxylating) (EC 2.4.2.19) from Streptococcus pyogenes

 43% id,
91% cov

More...

Synpcc7942_0783: ATP phosphoribosyltransferase catalytic subunit
is similar to:		 PaperBLAST

AO356_06970: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens

 39% id,
97% cov

Pf6N2E2_3253: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas fluorescens

 39% id,
97% cov

Psest_3299: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas stutzeri

 38% id,
99% cov

More...

Synpcc7942_1261: triosephosphate isomerase
is similar to:		 PaperBLAST

P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens

 39% id,
96% cov

Synpcc7942_2592: orotate phosphoribosyltransferase
is similar to:		 PaperBLAST

P9WHK9: orotate phosphoribosyltransferase (EC 2.4.2.10) from Mycobacterium tuberculosis

 40% id,
94% cov

PYRE_HALVD / D4GZW2: Orotate phosphoribosyltransferase; OPRT; OPRTase; EC 2.4.2.10 from Haloferax volcanii

 40% id,
89% cov

PYRE_CAEEL / O61790: Orotate phosphoribosyltransferase; OPRT; OPRTase; Uracil phosphoribosyltransferase; EC 2.4.2.10; EC 2.4.2.9 from Caenorhabditis elegans

 34% id,
79% cov

More...

Synpcc7942_0346: Protein of unknown function DUF152
is similar to:		 PaperBLAST

PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus

 35% id,
66% cov

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli

 34% id,
68% cov

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron

 28% id,
67% cov

Synpcc7942_0400: anthranilate synthase, component II
is similar to:		 PaperBLAST

TRPGD_ECOLI / P00904: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Escherichia coli
TrpD / b1263: anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27) from Escherichia coli
trpD / P00904: anthranilate synthase subunit TrpD (EC 2.4.2.18) from Escherichia coli

 41% id,
35% cov

TRPGD_SALTY / P00905: Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18 from Salmonella typhimurium

 40% id,
35% cov

Synpcc7942_0534: D-fructose-6-phosphate amidotransferase
is similar to:		 PaperBLAST

PUR1_BACSU / P00497: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Bacillus subtilis

 28% id,
48% cov

PUR1_ECOLI / P0AG16: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase; EC 2.4.2.14 from Escherichia coli
Ade / b2312: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli
purF / P0AG16: amidophosphoribosyltransferase (EC 2.4.2.14) from Escherichia coli

 27% id,
42% cov

PUR1_RAT / P35433: Amidophosphoribosyltransferase; ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPAT; EC 2.4.2.14 from Rattus norvegicus

 30% id,
38% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory