Curated BLAST for Genomes


Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 53 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 35 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0923: 5'-methylthioadenosine phosphorylase
is similar to:

flB / Q1EMV9: 5'-fluoro-5'-deoxy-adenosine phosphorylase (EC from Streptomyces cattleya

51% id,
94% cov

Q97W94: purine-nucleoside phosphorylase (EC; S-methyl-5'-thioadenosine phosphorylase (EC from Saccharolobus solfataricus

44% id,
98% cov

pnp / Q5JEQ6: adenosine phosphorylase (EC from Thermococcus kodakarensis

46% id,
91% cov


Synpcc7942_0346: Protein of unknown function DUF152
is similar to:

PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC; EC; EC from Geobacillus stearothermophilus

35% id,
66% cov

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC; EC; EC 1.10.3.-; EC from Escherichia coli

34% id,
68% cov

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC; EC; EC from Bacteroides thetaiotaomicron

28% id,
67% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory