Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_2545: aspartate aminotransferase
is similar to:
PaperBLAST

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

69% id,
100% cov

AAT_SYNY3 / Q55128: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp.

66% id,
100% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

51% id,
99% cov

More...

Synpcc7942_1794: succinyldiaminopimelate transaminase
is similar to:
PaperBLAST

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

64% id,
100% cov

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

41% id,
94% cov

AAT_SYNY3 / Q55128: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp.

30% id,
99% cov

More...

Synpcc7942_0191: Serine--glyoxylate transaminase
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

40% id,
97% cov

Synpcc7942_1029: branched-chain amino acid aminotransferase
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

35% id,
96% cov

Synpcc7942_1030: histidinol-phosphate aminotransferase
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

31% id,
98% cov

Synpcc7942_2160: alanine-glyoxylate aminotransferase
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

33% id,
93% cov

Synpcc7942_0853: L,L-diaminopimelate aminotransferase
is similar to:
PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

31% id,
94% cov

AAT_STRAW / Q82DR2: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Streptomyces avermitilis

26% id,
97% cov

AAPAT_CHLTE / Q8KDS8: Aspartate/prephenate aminotransferase; AspAT / PAT; EC 2.6.1.1; EC 2.6.1.78 from Chlorobaculum tepidum

24% id,
90% cov

More...

Synpcc7942_1109: threonine phosphate decarboxylase
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

28% id,
91% cov

Synpcc7942_1335: probable branched-chain amino acid aminotransferase
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

25% id,
84% cov

Synpcc7942_1725: transcriptional regulator, GntR family
is similar to:
PaperBLAST

PAT_PETHY / E9L7A5: Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; PhPPA-AT; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Petunia hybrida

24% id,
84% cov

Tat / P04694: tyrosine aminotransferase subunit (EC 2.6.1.1) from Rattus norvegicus

22% id,
91% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

23% id,
84% cov

More...

Synpcc7942_0071: pleiotropic regulatory protein-like
is similar to:
PaperBLAST

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

33% id,
31% cov

Synpcc7942_0707: arginine decarboxylase
is similar to:
PaperBLAST

PAT_ARATH / Q9SIE1: Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; AtAAT; AtPPA-AT; Protein MATERNAL EFFECT EMBRYO ARREST 17; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Arabidopsis thaliana
Q9SIE1: aspartate transaminase (EC 2.6.1.1); aspartate-prephenate aminotransferase (EC 2.6.1.78); glutamate-prephenate aminotransferase (EC 2.6.1.79) from Arabidopsis thaliana

27% id,
25% cov

PAT_PETHY / E9L7A5: Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; PhPPA-AT; EC 2.6.1.1; EC 2.6.1.78; EC 2.6.1.79 from Petunia hybrida

24% id,
24% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory