Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 36 curated entries in PaperBLAST's database that match '2.6.1.83'.

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0853: L,L-diaminopimelate aminotransferase
is similar to:
PaperBLAST

Q3MAL4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis

84% id,
99% cov

DAPAT_SYNY3 / Q55828: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Synechocystis sp.
Q55828: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Synechocystis sp.

82% id,
99% cov

A0A6P3CW87: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Verrucomicrobium spinosum

67% id,
100% cov

More...

Synpcc7942_1794: succinyldiaminopimelate transaminase
is similar to:
PaperBLAST

Q8TQ40: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans

43% id,
98% cov

DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica
Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica

42% id,
98% cov

O66630: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Aquifex aeolicus

40% id,
98% cov

More...

Synpcc7942_2545: aspartate aminotransferase
is similar to:
PaperBLAST

Q8TQ40: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans

30% id,
98% cov

DAPAT_MOOTA / Q2RK33: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica
Q2RK33: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica

29% id,
98% cov

DAPAT_GLOVI / Q7NDX4: LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Gloeobacter violaceus
Q7NDX4: LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Gloeobacter violaceus

28% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory