Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 114 curated entries in PaperBLAST's database that match '2.7.1.1' as complete word(s).

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_2111: xylose repressor
is similar to:
PaperBLAST

Q5RLG0: hexokinase (EC 2.7.1.1) from Thermus caldophilus

39% id,
97% cov

Q5SLJ4: hexokinase (EC 2.7.1.1) from Thermus thermophilus

38% id,
97% cov

glk / Q9X1I0: glucokinase subunit (EC 2.7.1.1) from Thermotoga maritima

35% id,
98% cov

More...

Synpcc7942_0221: glucokinase
is similar to:
PaperBLAST

Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli
glk / P0A6V8: glucokinase (EC 2.7.1.1; EC 2.7.1.8) from Escherichia coli

33% id,
95% cov

GL50803_8826 / E2RU42: glucokinase (EC 2.7.1.1) from Giardia intestinalis

30% id,
98% cov

Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli
glk / P0A6V8: glucokinase (EC 2.7.1.1; EC 2.7.1.8) from Escherichia coli

34% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory