Curated BLAST for Genomes


Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 41 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0221: glucokinase
is similar to:

G4T1H4: glucokinase (EC from Methylotuvimicrobium alcaliphilum

38% id,
98% cov

A0A3G4RI75: glucokinase (EC from Methylomonas methanica

38% id,
98% cov

Dshi_1655: glucokinase (EC from Dinoroseobacter shibae

33% id,
94% cov


Synpcc7942_2111: xylose repressor
is similar to:

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC from Streptomyces coelicolor
glkA: glucokinase; EC from Streptomyces coelicolor
P0A4E1: glucokinase (EC from Streptomyces coelicolor

37% id,
97% cov

B1VZT1: glucokinase (EC from Streptomyces griseus

36% id,
98% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC from Thermotoga maritima

35% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory