Curated BLAST for Genomes


Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 37 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 30 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_2111: xylose repressor
is similar to:

GLK_STRCO / P0A4E1: Glucokinase; Glucose kinase; ORF 3; EC from Streptomyces coelicolor
glkA: glucokinase; EC from Streptomyces coelicolor
P0A4E1: glucokinase (EC from Streptomyces coelicolor

37% id,
97% cov

B1VZT1: glucokinase (EC from Streptomyces griseus

36% id,
98% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC from Thermotoga maritima

35% id,
98% cov


Synpcc7942_0221: glucokinase
is similar to:

Dshi_1655: glucokinase (EC from Dinoroseobacter shibae

33% id,
94% cov

GLK_ECOLI / P0A6V8: Glucokinase; Glucose kinase; EC from Escherichia coli
Glk / b2388: glucokinase (EC; EC; EC from Escherichia coli

33% id,
95% cov

PS417_22685: Glucokinase (EC from Pseudomonas simiae

30% id,
98% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory