Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 135 curated entries in PaperBLAST's database that match '2.7.1.6'.

These curated entries have 100 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0401: diacylglycerol kinase
is similar to:
PaperBLAST

UDPK_BACSU / P19638: Undecaprenol kinase; UdpK; EC 2.7.1.66 from Bacillus subtilis
dgkA / P19638: undecaprenol kinase (EC 2.7.1.66) from Bacillus subtilis
P19638: diacylglycerol kinase (ATP) (EC 2.7.1.107); undecaprenol kinase (EC 2.7.1.66) from Bacillus subtilis

35% id,
91% cov

A0A151G991: undecaprenol kinase (EC 2.7.1.66) from Lactiplantibacillus plantarum

33% id,
87% cov

Synpcc7942_2111: xylose repressor
is similar to:
PaperBLAST

NANK_ECOLI / P45425: N-acetylmannosamine kinase; ManNAc kinase; N-acetyl-D-mannosamine kinase; EC 2.7.1.60 from Escherichia coli
YhcI / b3222: N-acetylmannosamine kinase (EC 2.7.1.60) from Escherichia coli
nanK / P45425: N-acetylmannosamine kinase (EC 2.7.1.60) from Escherichia coli

32% id,
98% cov

nanK / Q8ZLQ8: N-acetylmannosamine kinase subunit (EC 2.7.1.60) from Salmonella typhimurium

31% id,
98% cov

Q8RDN7: N-acylmannosamine kinase (EC 2.7.1.60) from Fusobacterium nucleatum

30% id,
99% cov

More...

Synpcc7942_2339: RfaE bifunctional protein, domain I
is similar to:
PaperBLAST

MIK_MAIZE / Q5GA22: Inositol 3-kinase; Myo-inositol kinase; Protein LOW PHYTIC ACID 3; EC 2.7.1.64 from Zea mays
lpa3 / Q5GA22: myo-inositol kinase (EC 2.7.1.64) from Zea mays

25% id,
73% cov

MIK_ORYSJ / Q84R36: Inositol 3-kinase; Myo-inositol kinase; OsMIK; Protein LOW PHYTIC ACID; EC 2.7.1.64 from Oryza sativa

26% id,
54% cov

MIK_ARATH / Q93Z01: Inositol 3-kinase; Myo-inositol kinase; AtMIK; EC 2.7.1.64 from Arabidopsis thaliana

37% id,
23% cov

Synpcc7942_0116: fructokinase
is similar to:
PaperBLAST

MIK_ARATH / Q93Z01: Inositol 3-kinase; Myo-inositol kinase; AtMIK; EC 2.7.1.64 from Arabidopsis thaliana

33% id,
20% cov

MIK_MAIZE / Q5GA22: Inositol 3-kinase; Myo-inositol kinase; Protein LOW PHYTIC ACID 3; EC 2.7.1.64 from Zea mays
lpa3 / Q5GA22: myo-inositol kinase (EC 2.7.1.64) from Zea mays

33% id,
19% cov

MIK_ORYSJ / Q84R36: Inositol 3-kinase; Myo-inositol kinase; OsMIK; Protein LOW PHYTIC ACID; EC 2.7.1.64 from Oryza sativa

35% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory