Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 25 curated entries in PaperBLAST's database that match '2.7.7.64' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1973: mannose-1-phosphate guanyltransferase
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

31% id,
95% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

29% id,
86% cov

GalU / b1236: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64; EC 2.7.7.9) from Escherichia coli
galU / P0AEP3: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Escherichia coli

26% id,
80% cov

More...

Synpcc7942_0498: mannose-1-phosphate guanyltransferase
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

29% id,
97% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

31% id,
26% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

31% id,
25% cov

More...

Synpcc7942_2101: glucose-1-phosphate thymidylyltransferase
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

27% id,
96% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

27% id,
83% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

28% id,
79% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory