Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 19 curated entries in PaperBLAST's database that match '3.1.2.4' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0597: naphthoate synthase
is similar to:
PaperBLAST

acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp.

34% id,
97% cov

Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri

27% id,
58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory