Curated BLAST for Genomes


Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 185 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 140 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0150: Dolichyl-phosphate beta-D-mannosyltransferase
is similar to:

Q2PCE3: alpha-glucosidase (EC from Ferroplasma acidiphilum

31% id,
86% cov

Synpcc7942_1085: glycogen branching enzyme
is similar to:

BAE48285.1: α-glucosidase (Gsj) (EC
Q33E90: alpha-glucosidase (EC from Geobacillus sp.

26% id,
21% cov

BAA12704.1: α-glucosidase / exo-α-1,4-glucosidase (EC

25% id,
21% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC; EC; EC from Dinoroseobacter shibae

27% id,
17% cov


Synpcc7942_1574: probable glucosidase
is similar to:

Q2V621: mannosyl-oligosaccharide glucosidase (EC; alpha-glucosidase (EC; mannosyl-oligosaccharide alpha-1,3-glucosidase (EC from Candida albicans

33% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory