Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 182 curated entries in PaperBLAST's database that match '3.2.1.20' as complete word(s).

These curated entries have 139 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0150: Dolichyl-phosphate beta-D-mannosyltransferase
is similar to:
PaperBLAST

Q2PCE3: alpha-glucosidase (EC 3.2.1.20) from Ferroplasma acidiphilum

31% id,
86% cov

Synpcc7942_1085: glycogen branching enzyme
is similar to:
PaperBLAST

BAE48285.1: α-glucosidase (Gsj) (EC 3.2.1.20)
Q33E90: alpha-glucosidase (EC 3.2.1.20) from Geobacillus sp.

26% id,
21% cov

BAA12704.1: α-glucosidase / exo-α-1,4-glucosidase (EC 3.2.1.20)

25% id,
21% cov

Dshi_1649: alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) from Dinoroseobacter shibae

27% id,
17% cov

More...

Synpcc7942_1574: probable glucosidase
is similar to:
PaperBLAST

Q2V621: mannosyl-oligosaccharide glucosidase (EC 3.2.1.106); alpha-glucosidase (EC 3.2.1.20); mannosyl-oligosaccharide alpha-1,3-glucosidase (EC 3.2.1.207) from Candida albicans

33% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory