Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 17 curated entries in PaperBLAST's database that match '3.5.1.18' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0277: NAD-dependent DNA ligase LigA
is similar to:
PaperBLAST

P9WHS9: succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) from Mycobacterium tuberculosis

26% id,
49% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory