Curated BLAST for Genomes


Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 6 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_2145: hypothetical protein
is similar to:

C8J_0890 / A0A1J6PBK3: N-carbamoylputrescine amidohydrolase (EC from Campylobacter jejuni

58% id,
100% cov

AGUB_SOLLC / Q9XGI9: N-carbamoylputrescine amidase; EC from Solanum lycopersicum

44% id,
97% cov

aguB / Q9I6J8: N-carbamoylputrascine amidohydrolase subunit (EC from Pseudomonas aeruginosa

43% id,
97% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory