Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 182 curated entries in PaperBLAST's database that match '3.5.1.9'.

These curated entries have 136 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_B2624: gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03
is similar to:
PaperBLAST

PAC1_PSES3 / P15557: Acylase ACY 1 proenzyme; EC 3.5.1.93; EC 2.3.2.2; EC 3.4.19.13 from Pseudomonas sp.
P15557: glutaryl-7-aminocephalosporanic-acid acylase (EC 3.5.1.93) from Pseudomonas sp.

31% id,
93% cov

Synpcc7942_0185: gamma-glutamyltransferase. Threonine peptidase. MEROPS family T03
is similar to:
PaperBLAST

PAC1_PSES3 / P15557: Acylase ACY 1 proenzyme; EC 3.5.1.93; EC 2.3.2.2; EC 3.4.19.13 from Pseudomonas sp.
P15557: glutaryl-7-aminocephalosporanic-acid acylase (EC 3.5.1.93) from Pseudomonas sp.

30% id,
93% cov

Synpcc7942_2124: acetylpolyamine aminohydolase
is similar to:
PaperBLAST

Q70I53: amidase (EC 3.5.1.4); histone deacetylase (EC 3.5.1.98) from Alcaligenes sp.

33% id,
81% cov

HDA8_ARATH / Q94EJ2: Histone deacetylase 8; EC 3.5.1.98 from Arabidopsis thaliana

30% id,
86% cov

Q2QWU2: histone deacetylase (EC 3.5.1.98) from Oryza sativa

36% id,
71% cov

More...

Synpcc7942_1393: histone deacetylase/AcuC/AphA family protein-like
is similar to:
PaperBLAST

HDA11_HUMAN / Q96DB2: Histone deacetylase 11; HD11; EC 3.5.1.98 from Homo sapiens
Q96DB2: histone deacetylase (EC 3.5.1.98) from Homo sapiens

32% id,
83% cov

B2GUW3: histone deacetylase (EC 3.5.1.98) from Rattus norvegicus

31% id,
83% cov

HDAC8_HUMAN / Q9BY41: Histone deacetylase 8; HD8; Protein deacetylase HDAC8; Protein decrotonylase HDAC8; EC 3.5.1.98; EC 3.5.1.- from Homo sapiens
Q9BY41: histone deacetylase (EC 3.5.1.98) from Homo sapiens

29% id,
76% cov

More...

Synpcc7942_2117: aspartyl/glutamyl-tRNA amidotransferase subunit A
is similar to:
PaperBLAST

FAAH_ARATH / Q7XJJ7: Fatty acid amide hydrolase; AtFAAH; N-acylethanolamine amidohydrolase; EC 3.5.1.99 from Arabidopsis thaliana
Q7XJJ7: fatty acid amide hydrolase (EC 3.5.1.99) from Arabidopsis thaliana

30% id,
77% cov

FAAH2_HUMAN / Q6GMR7: Fatty-acid amide hydrolase 2; Amidase domain-containing protein; Anandamide amidohydrolase 2; Oleamide hydrolase 2; EC 3.5.1.99 from Homo sapiens
FAAH2 / Q6GMR7: fatty-acid amide hydrolase 2 (EC 3.5.1.99; EC 3.5.1.60) from Homo sapiens
Q6GMR7: amidase (EC 3.5.1.4); fatty acid amide hydrolase (EC 3.5.1.99) from Homo sapiens

26% id,
88% cov

A0A077JIE7: acyl-homoserine-lactone acylase (EC 3.5.1.97) from Acinetobacter sp.

37% id,
47% cov

More...

Synpcc7942_0774: esterase
is similar to:
PaperBLAST

Q9X8R1: arylformamidase (EC 3.5.1.9) from Streptomyces coelicolor

33% id,
45% cov

Synpcc7942_0458: Carboxylesterase
is similar to:
PaperBLAST

Q9X8R1: arylformamidase (EC 3.5.1.9) from Streptomyces coelicolor

32% id,
36% cov

Synpcc7942_1706: hypothetical protein
is similar to:
PaperBLAST

Q7S8C9: histone deacetylase (EC 3.5.1.98) from Neurospora crassa

39% id,
4% cov

Synpcc7942_0374: hypothetical protein
is similar to:
PaperBLAST

HDA22_DICDI / Q54VQ7: Type-2 histone deacetylase 2; DdHdaC; EC 3.5.1.98 from Dictyostelium discoideum

26% id,
4% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory