Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 19 curated entries in PaperBLAST's database that match '3.5.3.12' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_2402: hypothetical protein
is similar to:
PaperBLAST

Q9PAQ3: agmatine deiminase (EC 3.5.3.12) from Xylella fastidiosa

49% id,
93% cov

Q9ZN18: agmatine deiminase (EC 3.5.3.12) from Helicobacter pylori

43% id,
99% cov

C8J_0892 / A0A5Y8XU16: agmatine deaminase (EC 3.5.3.12) from Campylobacter jejuni

36% id,
98% cov

More...

Synpcc7942_2145: hypothetical protein
is similar to:
PaperBLAST

Q89413: agmatine deiminase (EC 3.5.3.12) from Chlorella virus

38% id,
100% cov

Synpcc7942_2461: hypothetical protein
is similar to:
PaperBLAST

AGUA_ENTFA / Q837U5: Putative agmatine deiminase; Agmatine iminohydrolase; EC 3.5.3.12 from Enterococcus faecalis
Q837U5: agmatine deiminase (EC 3.5.3.12) from Enterococcus faecalis

31% id,
95% cov

S0F349: agmatine deiminase (EC 3.5.3.12) from Lactococcus lactis

31% id,
95% cov

Q9CEY6: agmatine deiminase (EC 3.5.3.12) from Lactococcus lactis

31% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory