Searching in Synechococcus elongatus PCC 7942 (SynE)
Found 47 curated entries in PaperBLAST's database that match '4.1.1.17' as complete word(s).
These curated entries have 35 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query
| Synpcc7942_0262: diaminopimelate decarboxylase is similar to: | PaperBLAST |
Q54UF3: ornithine decarboxylase (EC 4.1.1.17) from Dictyostelium discoideum | 25% id, 76% cov |
| Synpcc7942_0707: arginine decarboxylase is similar to: | PaperBLAST |
Q5ZH57: ornithine decarboxylase (EC 4.1.1.17) from Oenococcus oeni | 26% id, 51% cov |
H8ZI01: ornithine decarboxylase (EC 4.1.1.17) from Levilactobacillus brevis | 25% id, 53% cov |
SpeC / b2965: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 23% id, 56% cov |
| Synpcc7942_1037: arginine decarboxylase is similar to: | PaperBLAST |
DCOR1_DROME / P40807: Ornithine decarboxylase 1; ODC; EC 4.1.1.17 from Drosophila melanogaster | 27% id, 34% cov |
A0A1E1IR91: ornithine decarboxylase (EC 4.1.1.17) from Leishmania guyanensis | 25% id, 36% cov |
SPE1 / GB|AAC49877.1: ornithine decarboxylase (ODC); EC 4.1.1.17 from Candida albicans | 23% id, 27% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 697178-698701 (frame -1) on NC_007604 is similar to: | PaperBLAST |
SpeC / b2965: constitutive ornithine decarboxylase (EC 4.1.1.17) from Escherichia coli | 24% id, 57% cov |
A4Q8H0: ornithine decarboxylase (EC 4.1.1.17) from Serratia liquefaciens | 25% id, 48% cov |
Lawrence Berkeley National Laboratory