Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 11 curated entries in PaperBLAST's database that match '4.1.1.48'.

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1197: indole-3-glycerol-phosphate synthase
is similar to:
PaperBLAST

P84126: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Thermus thermophilus

46% id,
87% cov

A1KJ27: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis
A5U2W7: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis
P9WFX7: indole-3-glycerol-phosphate synthase (EC 4.1.1.48) from Mycobacterium tuberculosis

40% id,
98% cov

TRPC_ARATH / P49572: Indole-3-glycerol phosphate synthase, chloroplastic; IGPS; EC 4.1.1.48 from Arabidopsis thaliana

52% id,
75% cov

More...

Synpcc7942_0400: anthranilate synthase, component II
is similar to:
PaperBLAST

TRPG_YEAST / P00937: Multifunctional tryptophan biosynthesis protein; EC 4.1.3.27; EC 4.1.1.48 from Saccharomyces cerevisiae

48% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory