Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 10 curated entries in PaperBLAST's database that match '4.1.2.17' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1993: methylthioribulose-1-phosphate dehydratase
is similar to:
PaperBLAST

F8D9F5: D-ribulose 1-phosphate aldolase (EC 4.1.2.17) from Halopiger xanaduensis

29% id,
29% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory