Searching in Synechococcus elongatus PCC 7942 (SynE)
Found 90 curated entries in PaperBLAST's database that match '4.1.2.4'.
These curated entries have 57 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Synechococcus elongatus PCC 7942, or try another query
| Synpcc7942_0282: serine hydroxymethyltransferase is similar to: | PaperBLAST |
GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus | 62% id, 96% cov |
P0A825: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli | 61% id, 98% cov |
GLYA_METJA / Q58992: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-allo-threonine aldolase; EC 2.1.2.-; EC 4.1.2.49 from Methanocaldococcus jannaschii | 37% id, 92% cov |
| Synpcc7942_0983: deoxyribose-phosphate aldolase is similar to: | PaperBLAST |
C7E719: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Paenibacillus sp. | 38% id, 100% cov |
deoC / C0LSK9: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Yersinia sp. | 38% id, 99% cov |
DEOC_ACIB4 / B5IEU6: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Aciduliprofundum boonei | 39% id, 96% cov |
| Synpcc7942_1443: fructose-1,6-bisphosphate aldolase is similar to: | PaperBLAST |
KBAY_ECOLI / P0AB74: D-tagatose-1,6-bisphosphate aldolase subunit KbaY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 34% id, 100% cov |
KBAY_ECOLX / Q9KIP8: D-tagatose-1,6-bisphosphate aldolase subunit KbaY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 34% id, 100% cov |
GATY_ECOLI / P0C8J6: D-tagatose-1,6-bisphosphate aldolase subunit GatY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 34% id, 97% cov |
| Synpcc7942_1801: hypothetical protein is similar to: | PaperBLAST |
HNL_HEVBR / P52704: (S)-hydroxynitrile lyase; HbHNL; 2-hydroxy-2-methylpropanenitrile lyase; Acetone cyanohydrin lyase; Hydroxynitrile lyase; Oxynitrilase; EC 4.1.2.47 from Hevea brasiliensis | 30% id, 97% cov |
HNL_MANES / P52705: (S)-hydroxynitrile lyase; MeHNL; 2-hydroxy-2-methylpropanenitrile lyase; Acetone cyanohydrin lyase; Alpha-hydroxynitrile lyase; Hydroxynitrile lyase; EC 4.1.2.47 from Manihot esculenta | 28% id, 97% cov |
D1MX73: (S)-hydroxynitrile lyase (EC 4.1.2.47) from Baliospermum montanum | 27% id, 81% cov |
| Synpcc7942_0459: glutathione-dependent formaldehyde dehydrogenase is similar to: | PaperBLAST |
AHNL_LINUS / P93243: Aliphatic (R)-hydroxynitrile lyase; LuHNL; EC 4.1.2.46 from Linum usitatissimum | 34% id, 78% cov |
| Synpcc7942_1622: probable proteinase is similar to: | PaperBLAST |
DEOC_THEKO / Q877I0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Thermococcus kodakarensis | 22% id, 49% cov |
| Synpcc7942_1933: isopentenyl pyrophosphate isomerase is similar to: | PaperBLAST |
DEOC_AERPE / Q9Y948: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Aeropyrum pernix | 56% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory