Searching in Synechococcus elongatus PCC 7942 (SynE)
Found 26 curated entries in PaperBLAST's database that match '4.1.2.4' as complete word(s).
These curated entries have 20 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query
| Synpcc7942_0983: deoxyribose-phosphate aldolase is similar to: | PaperBLAST |
C7E719: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Paenibacillus sp. | 38% id, 100% cov |
deoC / C0LSK9: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Yersinia sp. | 38% id, 99% cov |
DEOC_ACIB4 / B5IEU6: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Aciduliprofundum boonei | 39% id, 96% cov |
| Synpcc7942_1622: probable proteinase is similar to: | PaperBLAST |
DEOC_THEKO / Q877I0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Thermococcus kodakarensis | 22% id, 49% cov |
| Synpcc7942_1933: isopentenyl pyrophosphate isomerase is similar to: | PaperBLAST |
DEOC_AERPE / Q9Y948: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Aeropyrum pernix | 56% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory