Searching in Synechococcus elongatus PCC 7942 (SynE)
Found 65 curated entries in PaperBLAST's database that match '4.2.1.3' as complete word(s).
These curated entries have 51 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query
Synpcc7942_0903: bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase is similar to: | PaperBLAST |
ACNB_SALTY / Q8ZRS8: Aconitate hydratase B; ACN; Aconitase; (2R,3S)-2-methylisocitrate dehydratase; (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase; 2-methyl-cis-aconitate hydratase; Iron-responsive protein-like; IRP-like; RNA-binding protein; EC 4.2.1.3; EC 4.2.1.99 from Salmonella typhimurium | 68% id, 99% cov |
ACNB_ECOLI / P36683: Aconitate hydratase B; ACN; Aconitase; (2R,3S)-2-methylisocitrate dehydratase; (2S,3R)-3-hydroxybutane-1,2,3-tricarboxylate dehydratase; 2-methyl-cis-aconitate hydratase; Iron-responsive protein-like; IRP-like; RNA-binding protein; EC 4.2.1.3; EC 4.2.1.99 from Escherichia coli | 67% id, 99% cov |
A0A2X5AHR8: aconitate hydratase (EC 4.2.1.3) from Helicobacter pylori | 61% id, 99% cov |
Synpcc7942_1898: isopropylmalate isomerase large subunit is similar to: | PaperBLAST |
ACOHC_CAEEL / Q23500: Cytoplasmic aconitate hydratase; Aconitase; Citrate hydro-lyase; Gex-3-interacting protein 22; EC 4.2.1.3 from Caenorhabditis elegans | 26% id, 51% cov |
Q9NFX2: aconitate hydratase (EC 4.2.1.3) from Drosophila melanogaster | 26% id, 50% cov |
ACOHC_RAT / Q63270: Cytoplasmic aconitate hydratase; Aconitase; Citrate hydro-lyase; Iron regulatory protein 1; IRP1; Iron-responsive element-binding protein 1; IRE-BP 1; EC 4.2.1.3 from Rattus norvegicus | 26% id, 50% cov |
Synpcc7942_2548: isopropylmalate isomerase small subunit is similar to: | PaperBLAST |
ACOHC_CAEEL / Q23500: Cytoplasmic aconitate hydratase; Aconitase; Citrate hydro-lyase; Gex-3-interacting protein 22; EC 4.2.1.3 from Caenorhabditis elegans | 36% id, 7% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory