Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 11 curated entries in PaperBLAST's database that match '4.2.1.41' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_1847: dihydrodipicolinate synthase
is similar to:
PaperBLAST

Q8UB77: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Agrobacterium fabrum

27% id,
90% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory