Curated BLAST for Genomes

 

Curated BLAST

Searching in Synechococcus elongatus PCC 7942 (SynE)

Found 33 curated entries in PaperBLAST's database that match '4.2.1.51' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Synechococcus elongatus PCC 7942, or try another query

Synpcc7942_0881: prephenate dehydratase
is similar to:
PaperBLAST

Q8DUV6: prephenate dehydratase (EC 4.2.1.51) from Streptococcus mutans

36% id,
97% cov

PHEA_METJA / Q58054: Prephenate dehydratase; PDT; MjPDT; EC 4.2.1.51 from Methanocaldococcus jannaschii

33% id,
100% cov

PHEA_MYCBO / Q7TVJ6: Prephenate dehydratase; PDT; EC 4.2.1.51 from Mycobacterium bovis
PHEA_MYCTU / P9WIC3: Prephenate dehydratase; PDT; EC 4.2.1.51 from Mycobacterium tuberculosis
P9WIC3: prephenate dehydratase (EC 4.2.1.51) from Mycobacterium tuberculosis

38% id,
87% cov

More...

Synpcc7942_1276: extracellular solute-binding protein, family 3
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

26% id,
85% cov

Synpcc7942_0076: extracellular solute-binding protein, family 3
is similar to:
PaperBLAST

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91 from Pseudomonas aeruginosa

23% id,
82% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory